Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- mitochondrion 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g097970.2.1 | Tomato | cytosol, extracellular | 87.18 | 88.44 |
| Solyc09g097960.2.1 | Tomato | cytosol | 86.89 | 88.15 |
| Solyc09g098000.2.1 | Tomato | cytosol | 80.91 | 81.38 |
| AT1G60710.1 | Thale cress | cytosol | 77.21 | 78.55 |
| Bra027140.1-P | Field mustard | cytosol, nucleus, peroxisome | 74.07 | 77.84 |
| AT1G60690.1 | Thale cress | cytosol | 74.93 | 76.23 |
| AT1G60680.1 | Thale cress | cytosol, mitochondrion | 73.79 | 74.86 |
| AT1G60750.1 | Thale cress | cytosol | 70.37 | 74.85 |
| CDY70614 | Canola | cytosol | 70.37 | 73.29 |
| Bra031486.1-P | Field mustard | cytosol | 69.8 | 72.92 |
| AT1G60730.3 | Thale cress | cytosol | 75.78 | 72.88 |
| AT1G10810.1 | Thale cress | mitochondrion, peroxisome, plastid | 71.23 | 72.67 |
| Bra031485.1-P | Field mustard | cytosol, mitochondrion | 74.07 | 72.22 |
| Bra027135.1-P | Field mustard | cytosol, mitochondrion, nucleus | 51.85 | 71.37 |
| Bra027138.1-P | Field mustard | cytosol | 50.71 | 70.63 |
| Bra027142.1-P | Field mustard | cytosol | 72.93 | 69.75 |
| CDY34139 | Canola | cytosol | 49.86 | 69.17 |
| Bra027139.1-P | Field mustard | cytosol | 49.57 | 68.77 |
| Bra027134.1-P | Field mustard | cytosol | 66.67 | 68.62 |
| Solyc01g065490.2.1 | Tomato | cytosol | 62.11 | 68.34 |
| Solyc09g098090.2.1 | Tomato | cytosol | 65.81 | 66.96 |
| CDY34675 | Canola | cytosol | 39.6 | 65.88 |
| Solyc01g097380.1.1 | Tomato | plastid | 55.27 | 58.26 |
| Solyc01g097390.2.1 | Tomato | plastid | 56.13 | 57.27 |
| Solyc09g082720.2.1 | Tomato | cytosol, plastid | 52.71 | 53.62 |
| Solyc09g082730.2.1 | Tomato | cytosol | 51.85 | 52.6 |
| Solyc09g097950.1.1 | Tomato | cytosol | 19.94 | 46.98 |
| Solyc07g043570.2.1 | Tomato | plastid | 27.92 | 27.61 |
| Solyc12g098150.1.1 | Tomato | plastid | 25.07 | 26.67 |
| Solyc09g074310.2.1 | Tomato | endoplasmic reticulum, extracellular | 25.64 | 25.07 |
| Solyc03g082560.2.1 | Tomato | nucleus | 24.79 | 23.51 |
| Solyc06g053600.2.1 | Tomato | plastid | 26.5 | 23.19 |
Protein Annotations
| EnsemblPlants:Solyc09g097980.2.1 | EnsemblPlantsGene:Solyc09g097980.2 | Gene3D:3.20.20.100 | InterPro:IPR036812 | InterPro:NADP_OxRdtase_dom | InterPro:NADP_OxRdtase_dom_sf |
| ncoils:Coil | PANTHER:PTHR43625 | PANTHER:PTHR43625:SF18 | PFAM:PF00248 | SUPFAM:SSF51430 | UniParc:UPI000276BF81 |
| UniProt:K4CWX0 | MapMan:50.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:71924051..71927401
Molecular Weight (calculated)
38576.4 Da
IEP (calculated)
6.674
GRAVY (calculated)
-0.303
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEGTKVGR MKLGSEGLQV SVQGLGCMGM SAFYGPPKPE PEMIELIHHA INSGVTLLDS SDVYGPYTNE ILIGKALKGG MRERVELATK FGIVLGDEKK
101: AEGKREVHGN PAYVRSACEA SLKRLDVDCI DLYYQHRIDT RVPIEVTVGE LKKLVEEGKI KYIGLSEASA STIRRAHAVH PITAVQLEWS LWSRDVEEEI
201: IPTCRELGIG IVAYSPLGRG FLSSGPKLLE DLSNEDYRKH LPRFQAENLE HNKKLYERIC QMAAKKGCTP SQLALAWVHH QGNDVCPIPG TTKIENFNQN
301: IGALSVKLTS EDMAELESIA SANAVQGDRY IPGMSTFKNS ETPPLSAWKA T
101: AEGKREVHGN PAYVRSACEA SLKRLDVDCI DLYYQHRIDT RVPIEVTVGE LKKLVEEGKI KYIGLSEASA STIRRAHAVH PITAVQLEWS LWSRDVEEEI
201: IPTCRELGIG IVAYSPLGRG FLSSGPKLLE DLSNEDYRKH LPRFQAENLE HNKKLYERIC QMAAKKGCTP SQLALAWVHH QGNDVCPIPG TTKIENFNQN
301: IGALSVKLTS EDMAELESIA SANAVQGDRY IPGMSTFKNS ETPPLSAWKA T
001: MAEACGVRRM KLGSQGLEVS AQGLGCMGLS AFYGAPKPEN EAIALIHHAI HSGVTLLDTS DIYGPETNEV LLGKALKDGV REKVELATKF GISYAEGKRE
101: VRGDPEYVRA ACEASLKRLD IACIDLYYQH RVDTRVPIEI TMGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITAVQ IEWSLWTRDV EEEIIPTCRE
201: LGIGIVAYSP LGRGFFASGP KLVENLEKDD FRKALPRFQE ENLDHNKIVY EKVCAISEKK GCTPGQLALA WVHHQGDDVC PIPGTTKIEN LKQNIGALSV
301: KLTPEEMTEL EAIAQPGFVK GDRYSNMIPT FKNAETPPLS AWKAA
101: VRGDPEYVRA ACEASLKRLD IACIDLYYQH RVDTRVPIEI TMGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITAVQ IEWSLWTRDV EEEIIPTCRE
201: LGIGIVAYSP LGRGFFASGP KLVENLEKDD FRKALPRFQE ENLDHNKIVY EKVCAISEKK GCTPGQLALA WVHHQGDDVC PIPGTTKIEN LKQNIGALSV
301: KLTPEEMTEL EAIAQPGFVK GDRYSNMIPT FKNAETPPLS AWKAA
Arabidopsis Description
ATB2Probable aldo-keto reductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.