Factsheet for Solyc01g097380.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
vacuole 1
peroxisome 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g097390.2.1	Tomato	plastid	93.69	90.7
KRH68728	Soybean	cytosol, nucleus	69.07	67.85
VIT_14s0030g02050.t01	Wine grape	cytosol	68.77	66.76
VIT_14s0030g02020.t01	Wine grape	cytosol	69.07	66.28
EER91589	Sorghum	cytosol	67.87	66.28
VIT_14s0030g01980.t01	Wine grape	cytosol	67.87	66.08
HORVU7Hr1G040080.2	Barley	cytosol	14.41	65.75
VIT_14s0030g01970.t01	Wine grape	cytosol	67.87	65.13
Os10t0419100-01	Rice	cytosol, plasma membrane	66.97	65.01
TraesCS7B01G101300.1	Wheat	cytosol	64.86	64.29
TraesCS7D01G197100.1	Wheat	cytosol	65.77	64.22
TraesCS7A01G195600.1	Wheat	cytosol	65.47	63.93
HORVU7Hr1G039930.1	Barley	cytosol	64.56	63.05
KRH34080	Soybean	cytosol	63.66	62.54
TraesCS3D01G230600.1	Wheat	cytosol, golgi, unclear	63.66	62.17
TraesCS3B01G252400.1	Wheat	cytosol	63.66	62.17
TraesCS3A01G222900.1	Wheat	cytosol, golgi, nucleus	62.76	61.29
HORVU3Hr1G054640.2	Barley	cytosol	62.76	61.29
VIT_14s0030g01990.t01	Wine grape	cytosol	64.56	61.25
VIT_14s0030g02060.t01	Wine grape	peroxisome	64.56	61.25
Solyc09g082720.2.1	Tomato	cytosol, plastid	63.36	61.16
Os01t0618100-01	Rice	plasma membrane	63.06	61.05
OQU87178	Sorghum	cytosol	63.06	61.05
Solyc09g082730.2.1	Tomato	cytosol	63.06	60.69
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	61.26	59.65
TraesCS7B01G089600.1	Wheat	cytosol	61.26	59.13
TraesCS7A01G184900.1	Wheat	cytosol	60.06	58.82
TraesCS7B01G090000.1	Wheat	cytosol	61.26	58.79
EES03282	Sorghum	cytosol	61.56	58.74
TraesCS7A01G185000.1	Wheat	cytosol	60.66	58.38
Os04t0338100-01	Rice	cytosol, nucleus	19.52	58.04
TraesCS7D01G186400.1	Wheat	cytosol	60.96	58.0
Solyc09g097980.2.1	Tomato	cytosol, extracellular	58.26	55.27
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	18.32	54.95
Solyc09g097970.2.1	Tomato	cytosol, extracellular	57.06	54.91
Solyc09g097960.2.1	Tomato	cytosol	57.06	54.91
TraesCS7B01G089800.1	Wheat	cytosol	52.55	54.69
Solyc09g098090.2.1	Tomato	cytosol	56.46	54.49
KXG32909	Sorghum	plastid	62.16	53.91
Solyc09g098000.2.1	Tomato	cytosol	56.46	53.87
KXG33406	Sorghum	mitochondrion	50.15	52.85
Solyc01g065490.2.1	Tomato	cytosol	49.25	51.41
KRH07938	Soybean	cytosol, extracellular, plastid	15.92	50.0
Zm00001d011363_P002	Maize	cytosol	52.85	49.44
Zm00001d032921_P001	Maize	cytosol	65.17	34.5
Solyc09g097950.1.1	Tomato	cytosol	13.51	30.2
Solyc07g043570.2.1	Tomato	plastid	25.83	24.23
Solyc12g098150.1.1	Tomato	plastid	23.72	23.94
Solyc09g074310.2.1	Tomato	endoplasmic reticulum, extracellular	24.62	22.84
Solyc06g053600.2.1	Tomato	plastid	26.43	21.95
Solyc03g082560.2.1	Tomato	nucleus	23.12	20.81

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	UniProt:K4B0C5	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	PANTHER:PTHR43625	PANTHER:PTHR43625:SF2	SUPFAM:SSF51430
EnsemblPlantsGene:Solyc01g097380.1	EnsemblPlants:Solyc01g097380.1.1	UniParc:UPI0002768020	:	:	:

Description

No Description!

Coordinates

chr1:+:88263071..88265858

Molecular Weight (calculated)

36603.8 Da

IEP (calculated)

5.443

GRAVY (calculated)

-0.190

Length

333 amino acids

Sequence
(BLAST)

001: MADAVEMPRV KLGSQGLEVS KLGFGCMGLT GAYSSPVPEE EGIAIIKEAF SKGVTFFDSS DVYGTDHANE YLIGKLATKF GIYKIEPTKV TVKGTPEYVR
101: SCCEASLKCL QVDYIDLYYV HRIDTTVPIE ETMGELKKLV EEGKIKYIGL SEAHPETIRR AHAVHPITAV QQEYSLWTRD VEDDIIPVCR ELGIGIVPYS
201: PVGRGLFAGK AVIESLPANS FLTTQPRFTG ENFEKNESIY FHMEGVAKKH GCSPAQLAIS WVLHQGDDIV PIPGTTKIKN LHDNIGSVRV KLTEEDVNEL
301: SDAVPASEVA GQRIGEALYK SSYKFSITPP QTK

Best Arabidopsis Sequence Match ( AT1G60680.1 )
(BLAST)

001: MAEACRVRRM KLGSQGLEVS AQGLGCMALS ARYGAPKPET DAIALLHHAI NSGVTFFDTS DMYGPETNEL LLGKALKDGV KEKVELATKF GFFIVEGEIS
101: EVRGDPEYVR AACEASLKRL DIACIDLYYQ HRIDTRVPIE ITMRELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QIEWSLWSRD AEEDIIPICR
201: ELGIGIVAYS PLGRGFLAAG PKLAENLEND DFRKTLPRFQ QENVDHNKIL FEKVSAMAEK KGCTPAQLAL AWVHHQGDDV CPIPGTTKIE NLNQNIRALS
301: VKLTPEEISE LDSLAKPESV KGERYMASMS TFKNSNTPPL SSWKAT

Arabidopsis Description

AGD2Probable aldo-keto reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84M96]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.