Factsheet for VIT_14s0030g01980.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 1
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g02020.t01	Wine grape	cytosol	96.49	95.1
VIT_14s0030g01970.t01	Wine grape	cytosol	87.43	86.17
VIT_14s0030g02050.t01	Wine grape	cytosol	83.04	82.8
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	24.85	76.58
VIT_14s0030g01990.t01	Wine grape	cytosol	74.85	72.93
VIT_14s0030g02060.t01	Wine grape	peroxisome	74.56	72.65
HORVU7Hr1G040080.2	Barley	cytosol	15.2	71.23
VIT_14s0030g01960.t01	Wine grape	cytosol	70.47	71.09
EER91589	Sorghum	cytosol	70.47	70.67
KRH68728	Soybean	cytosol, nucleus	69.88	70.5
Os10t0419100-01	Rice	cytosol, plasma membrane	69.59	69.39
TraesCS7A01G195600.1	Wheat	cytosol	69.01	69.21
HORVU7Hr1G039930.1	Barley	cytosol	69.01	69.21
KRH34080	Soybean	cytosol	68.42	69.03
Solyc01g097390.2.1	Tomato	plastid	69.3	68.9
TraesCS7B01G101300.1	Wheat	cytosol	67.54	68.75
TraesCS7D01G197100.1	Wheat	cytosol	68.42	68.62
Solyc01g097380.1.1	Tomato	plastid	66.08	67.87
TraesCS3B01G252400.1	Wheat	cytosol	67.54	67.74
HORVU3Hr1G054640.2	Barley	cytosol	67.54	67.74
TraesCS3D01G230600.1	Wheat	cytosol, golgi, unclear	67.25	67.45
OQU87178	Sorghum	cytosol	67.54	67.15
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	66.96	66.96
TraesCS3A01G222900.1	Wheat	cytosol, golgi, nucleus	66.67	66.86
VIT_05s0020g04130.t01	Wine grape	cytosol	67.25	66.67
Os01t0618100-01	Rice	plasma membrane	66.96	66.57
EES03282	Sorghum	cytosol	67.25	65.9
TraesCS7B01G089600.1	Wheat	cytosol	66.08	65.51
TraesCS7D01G186400.1	Wheat	cytosol	66.67	65.14
TraesCS7A01G185000.1	Wheat	cytosol	65.79	65.03
TraesCS7A01G184900.1	Wheat	cytosol	64.62	65.0
TraesCS7B01G090000.1	Wheat	cytosol	65.79	64.84
TraesCS7B01G089800.1	Wheat	cytosol	58.48	62.5
KXG33406	Sorghum	mitochondrion	57.02	61.71
Os04t0338100-01	Rice	cytosol, nucleus	19.88	60.71
KXG32909	Sorghum	plastid	67.25	59.9
VIT_05s0062g01000.t01	Wine grape	cytosol	55.26	59.81
VIT_05s0062g00980.t01	Wine grape	cytosol	54.68	58.8
KRH07938	Soybean	cytosol, extracellular, plastid	17.84	57.55
VIT_05s0062g01010.t01	Wine grape	cytosol	52.05	56.33
Zm00001d011363_P002	Maize	cytosol	56.14	53.93
VIT_05s0062g00950.t01	Wine grape	cytosol	31.29	53.5
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	20.47	46.36
Zm00001d032921_P001	Maize	cytosol	69.88	38.0
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	15.79	29.51
VIT_05s0051g00650.t01	Wine grape	mitochondrion	25.44	26.52
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	24.85	26.23
VIT_12s0028g01100.t01	Wine grape	plastid	27.78	25.89
VIT_05s0049g01130.t01	Wine grape	plastid	28.07	22.97

Protein Annotations

EntrezGene:100248669	wikigene:100248669	Gene3D:3.20.20.100	MapMan:50.1.1	ProteinID:CBI34181	ProteinID:CBI34181.3
ncoils:Coil	UniProt:D7TUK6	EMBL:FN596249	InterPro:IPR036812	EntrezGene:LOC100248669	wikigene:LOC100248669
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PANTHER:PTHR43625	PANTHER:PTHR43625:SF2	SUPFAM:SSF51430
UniParc:UPI00015CB913	ArrayExpress:VIT_14s0030g01980	EnsemblPlantsGene:VIT_14s0030g01980	EnsemblPlants:VIT_14s0030g01980.t01	unigene:Vvi.25417	RefSeq:XP_002278643
RefSeq:XP_002278643.1	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:6982913..6991182

Molecular Weight (calculated)

37961.7 Da

IEP (calculated)

5.732

GRAVY (calculated)

-0.218

Length

342 amino acids

Sequence
(BLAST)

001: MGEIQIPRVK LGNQGLEVSK LGFGCMGLSG VYNNPVPDDV GIAIIKHAFS KGITFFDTAD VYGPFTNEVL IGKALKELPR EKIQLATKFG IAGFDPATGM
101: TVNGTPKYVR SCCEASLKRL DVEYIDLYYQ HRVDKSVPIE ETMEELKKLV AEGKIKYIGL SEPSPDTIRR AHAVHPITAL QMEWSLWTRD IEEEIVPLCR
201: ELGIGIVPYS PLGRGFFGGK VVDENAPANT FLRLNPRFQG ENFEKNKNIY TKMEMLAEKH RCTPAQLALA WVLHQGDDVA PIPGTTKIKN LDDNISSLRL
301: NLTKEDLEEI SNAAPLTEVA GARVPDLFNS TSWQFADTPV RV

Best Arabidopsis Sequence Match ( AT1G60690.1 )
(BLAST)

001: MAESCRVRRI KLGSQGLEVS AQGLGCMGLT GHYGASKPET EAIALIHHAI HSGVTFLDTS DMYGPETNEI LLGKALKDGV REKVELATKF GISYAEGNRE
101: IKGDPAYVRA ACEASLKRLD VTCIDLYYQH RIDTRVPIEI TMGELKKLIE EGKIKYIGLS EASASTIRRA HTVHPITAVQ LEWSLWTRDV EEEIVPTCRE
201: LGIGIVSYSP LGRGFFASGP KLVENLDNND FRKALPRFQQ ENLDHNKILY EKVSAMSEKK GCTPAQLALA WVHHQGDDVC PIPGTTKIEN LNQNIRALSV
301: KLTPEEMSEL ETIAQPESVK GERYMATVPT FKNSDTPPLS SWNAV

Arabidopsis Description

Probable aldo-keto reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:O22707]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.