Factsheet for VIT_05s0062g01000.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0062g00980.t01	Wine grape	cytosol	90.82	90.25
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	40.51	84.77
VIT_05s0062g01010.t01	Wine grape	cytosol	82.59	82.59
VIT_05s0062g00950.t01	Wine grape	cytosol	50.95	80.5
VIT_14s0030g01980.t01	Wine grape	cytosol	59.81	55.26
VIT_14s0030g02020.t01	Wine grape	cytosol	59.81	54.47
VIT_14s0030g02050.t01	Wine grape	cytosol	58.23	53.64
VIT_14s0030g01960.t01	Wine grape	cytosol	56.65	52.8
VIT_14s0030g01970.t01	Wine grape	cytosol	57.28	52.16
VIT_05s0020g04130.t01	Wine grape	cytosol	56.33	51.59
VIT_14s0030g01990.t01	Wine grape	cytosol	56.65	51.0
VIT_14s0030g02060.t01	Wine grape	peroxisome	56.33	50.71
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	11.71	33.33
VIT_12s0028g01100.t01	Wine grape	plastid	30.06	25.89
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	25.63	25.0
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	13.29	22.95
VIT_05s0051g00650.t01	Wine grape	mitochondrion	23.1	22.26
VIT_05s0049g01130.t01	Wine grape	plastid	29.11	22.01

Protein Annotations

EntrezGene:100241166	wikigene:100241166	Gene3D:3.20.20.100	MapMan:50.1.1	EMBL:AM426249	ProteinID:CAN68994
ProteinID:CAN68994.1	ProteinID:CBI39433	ProteinID:CBI39433.3	UniProt:D7U9L9	EMBL:FN596745	InterPro:IPR036812
EntrezGene:LOC100241166	wikigene:LOC100241166	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PANTHER:PTHR43625
PANTHER:PTHR43625:SF18	SUPFAM:SSF51430	TIGR:TC55278	UniParc:UPI0001BE50E4	ArrayExpress:VIT_05s0062g01000	EnsemblPlantsGene:VIT_05s0062g01000
EnsemblPlants:VIT_05s0062g01000.t01	unigene:Vvi.6652	RefSeq:XP_002266027	RefSeq:XP_002266027.1	RefSeq:XP_003632048	RefSeq:XP_003632048.1
RefSeq:XP_003632049	RefSeq:XP_003632049.1	:	:	:	:

Description

No Description!

Coordinates

chr5:-:19600446..19604445

Molecular Weight (calculated)

35008.9 Da

IEP (calculated)

6.116

GRAVY (calculated)

-0.286

Length

316 amino acids

Sequence
(BLAST)

001: MSAFYGPPKP EEDMIALIHH AVNSGITLLD TSDMYGPFTN EILLGKALKG GVREKVELAS KFGIIYADGK RDVRGDPAYV RAACEASLKR LEVDCIDLYY
101: QHRIDTRVPI EVTIGELKKL VEEGKIKYIG LSEASASTIR RAHAVHPITA VQLEWSLWTR DVEEEIVPTC RELGIGIVAY SPLGRGFFSS GTKLIENLSN
201: NDFRKNLPRF QPENLGHNKI LYERVSEIAT RKGCTPSQLA LAWVHHQGDD VCPIPGTTKI ENLKQNIGAL SVKLTPEEMA ELESIASADG VKGDRYESTA
301: FTWKTADTPP LDSWKA

Best Arabidopsis Sequence Match ( AT1G60710.1 )
(BLAST)

001: MAEACGVRRM KLGSQGLEVS AQGLGCMGLS AFYGAPKPEN EAIALIHHAI HSGVTLLDTS DIYGPETNEV LLGKALKDGV REKVELATKF GISYAEGKRE
101: VRGDPEYVRA ACEASLKRLD IACIDLYYQH RVDTRVPIEI TMGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITAVQ IEWSLWTRDV EEEIIPTCRE
201: LGIGIVAYSP LGRGFFASGP KLVENLEKDD FRKALPRFQE ENLDHNKIVY EKVCAISEKK GCTPGQLALA WVHHQGDDVC PIPGTTKIEN LKQNIGALSV
301: KLTPEEMTEL EAIAQPGFVK GDRYSNMIPT FKNAETPPLS AWKAA

Arabidopsis Description

ATB2Probable aldo-keto reductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.