Factsheet for VIT_05s0062g00980.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 2
plastid 1
plasma membrane 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0062g01000.t01	Wine grape	cytosol	90.25	90.82
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	42.77	90.07
VIT_05s0062g01010.t01	Wine grape	cytosol	83.02	83.54
VIT_05s0062g00950.t01	Wine grape	cytosol	51.26	81.5
VIT_14s0030g01980.t01	Wine grape	cytosol	58.8	54.68
VIT_14s0030g01960.t01	Wine grape	cytosol	57.55	53.98
VIT_14s0030g02020.t01	Wine grape	cytosol	58.8	53.89
VIT_14s0030g02050.t01	Wine grape	cytosol	57.86	53.64
VIT_05s0020g04130.t01	Wine grape	cytosol	56.92	52.46
VIT_14s0030g01970.t01	Wine grape	cytosol	56.6	51.87
VIT_14s0030g01990.t01	Wine grape	cytosol	55.66	50.43
VIT_14s0030g02060.t01	Wine grape	peroxisome	55.35	50.14
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	12.26	35.14
VIT_12s0028g01100.t01	Wine grape	plastid	28.93	25.07
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	25.16	24.69
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	13.84	24.04
VIT_05s0051g00650.t01	Wine grape	mitochondrion	24.21	23.48
VIT_05s0049g01130.t01	Wine grape	plastid	28.93	22.01

Protein Annotations

EntrezGene:100246287	wikigene:100246287	EntrezGene:100263442	wikigene:100263442	Gene3D:3.20.20.100	MapMan:50.1.1
EMBL:AM448749	ProteinID:CAN67592	ProteinID:CAN67592.1	ProteinID:CBI39431	ProteinID:CBI39431.3	UniProt:D7U9L7
EMBL:FN596745	InterPro:IPR036812	EntrezGene:LOC100246287	wikigene:LOC100246287	EntrezGene:LOC100263442	wikigene:LOC100263442
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PANTHER:PTHR43625	PANTHER:PTHR43625:SF18	SUPFAM:SSF51430
UniParc:UPI0001BE50AB	ArrayExpress:VIT_05s0062g00980	EnsemblPlantsGene:VIT_05s0062g00980	EnsemblPlants:VIT_05s0062g00980.t01	unigene:Vvi.9284	RefSeq:XP_002265927
RefSeq:XP_002265927.1	RefSeq:XP_002266155	RefSeq:XP_002266155.1	RefSeq:XP_003632047	RefSeq:XP_003632047.1	:

Description

No Description!

Coordinates

chr5:-:19571706..19574152

Molecular Weight (calculated)

35366.2 Da

IEP (calculated)

5.891

GRAVY (calculated)

-0.291

Length

318 amino acids

Sequence
(BLAST)

001: MGMSAFYGPP KPEQDMIALI HHAVNSGITF LDTSDIYGPF TNEILLGKAL KGGVREKVEL ATKFGVIYDD RVRDARGDPA YVRACCEASL KRLEVDCIDL
101: YYQHRIDTRV PIEVTVGELK KLVEEGKIKY IGLSEASAST IRRAHAVHPI TAVQLEWSLW SRDVEEDIVP TCRELGIGIV AYSPLGRGFL SSGAKMVENL
201: SDNDSRKYFP RFQPENLEHN KILYERVSEI ATRKGCTPSQ LALAWVHHQG DDVCPIPGTT KIENLNQNIG ALSVKLTPEE MAELESIASA DVVKGDRYQS
301: TTFTWKNSDT PPLASWKA

Best Arabidopsis Sequence Match ( AT1G60690.1 )
(BLAST)

001: MAESCRVRRI KLGSQGLEVS AQGLGCMGLT GHYGASKPET EAIALIHHAI HSGVTFLDTS DMYGPETNEI LLGKALKDGV REKVELATKF GISYAEGNRE
101: IKGDPAYVRA ACEASLKRLD VTCIDLYYQH RIDTRVPIEI TMGELKKLIE EGKIKYIGLS EASASTIRRA HTVHPITAVQ LEWSLWTRDV EEEIVPTCRE
201: LGIGIVSYSP LGRGFFASGP KLVENLDNND FRKALPRFQQ ENLDHNKILY EKVSAMSEKK GCTPAQLALA WVHHQGDDVC PIPGTTKIEN LNQNIRALSV
301: KLTPEEMSEL ETIAQPESVK GERYMATVPT FKNSDTPPLS SWNAV

Arabidopsis Description

Probable aldo-keto reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:O22707]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.