Factsheet for VIT_05s0049g01130.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042008	Potato	cytosol, plastid	77.99	81.5
Solyc06g053600.2.1	Tomato	plastid	77.99	81.3
KRH69116	Soybean	plastid	79.43	78.86
TraesCS4D01G078200.1	Wheat	plastid	70.57	72.84
TraesCS4A01G235500.1	Wheat	plastid	70.1	72.35
TraesCS4B01G079400.1	Wheat	plastid	69.86	72.1
EER93819	Sorghum	plastid	68.66	71.57
GSMUA_Achr4P04780_001	Banana	plastid	71.53	70.69
Os03t0611200-01	Rice	plastid	68.42	70.62
AT1G04420.1	Thale cress	plastid	69.38	70.39
CDY18231	Canola	cytosol	66.99	67.8
TraesCS4B01G079600.1	Wheat	mitochondrion	50.72	67.3
TraesCS4A01G235300.1	Wheat	plastid	64.35	67.25
Bra015315.1-P	Field mustard	cytosol	66.75	66.43
OQU91377	Sorghum	plastid	64.35	66.42
TraesCS4D01G078600.1	Wheat	plastid	65.55	66.18
CDX89825	Canola	plastid	68.66	62.66
Zm00001d033338_P002	Maize	plastid	68.18	60.51
HORVU4Hr1G013530.5	Barley	mitochondrion	70.1	60.41
HORVU4Hr1G013600.1	Barley	mitochondrion	28.95	60.2
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	22.25	50.82
Zm00001d043151_P001	Maize	plastid	21.05	43.14
VIT_05s0062g01000.t01	Wine grape	cytosol	22.01	29.11
VIT_05s0062g00980.t01	Wine grape	cytosol	22.01	28.93
VIT_05s0062g01010.t01	Wine grape	cytosol	21.77	28.8
VIT_05s0062g00950.t01	Wine grape	cytosol	13.64	28.5
VIT_05s0051g00650.t01	Wine grape	mitochondrion	22.25	28.35
VIT_14s0030g02050.t01	Wine grape	cytosol	23.21	28.28
VIT_14s0030g01980.t01	Wine grape	cytosol	22.97	28.07
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	7.42	27.93
VIT_14s0030g02020.t01	Wine grape	cytosol	22.97	27.67
VIT_05s0020g04130.t01	Wine grape	cytosol	22.49	27.25
VIT_14s0030g01960.t01	Wine grape	cytosol	21.29	26.25
VIT_14s0030g01970.t01	Wine grape	cytosol	21.77	26.22
VIT_14s0030g01990.t01	Wine grape	cytosol	22.01	26.21
VIT_14s0030g02060.t01	Wine grape	peroxisome	22.01	26.21
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	17.22	22.22
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	7.89	21.85
VIT_12s0028g01100.t01	Wine grape	plastid	19.14	21.8

Protein Annotations

EntrezGene:100259668	wikigene:100259668	Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/keto_reductase	ProteinID:CBI23651
ProteinID:CBI23651.3	UniProt:D7SZH4	EMBL:FN595496	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	EntrezGene:LOC100259668	wikigene:LOC100259668
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	PANTHER:PTHR43364	PANTHER:PTHR43364:SF4
SUPFAM:SSF51430	TIGR:TC60986	UniParc:UPI00015C743C	ArrayExpress:VIT_05s0049g01130	EnsemblPlantsGene:VIT_05s0049g01130	EnsemblPlants:VIT_05s0049g01130.t01
unigene:Vvi.3561	RefSeq:XP_002281335	RefSeq:XP_002281335.2	RefSeq:XP_010650093.1	:	:

Description

No Description!

Coordinates

chr5:+:8179460..8185573

Molecular Weight (calculated)

47213.4 Da

IEP (calculated)

8.906

GRAVY (calculated)

-0.323

Length

418 amino acids

Sequence
(BLAST)

001: MVSIATIPAF PCNNTRSFPR HFLTRRSFSR HILTRRSTPP SFSAGTWRST AITSKLKEKT ALEYRKLGDS DLNISEITLG TMTFGEQNTE NEAHEILSYA
101: FEHGINALDT AEAYPIPMKK ETQGKTDLYI ASWLKSQPRD KVILATKVCG YSERSSYLRD NAKVLRVDAA NIRESVEKSL KRLNTDYIDL LQIHWPDRYV
201: ALFGEFSYDP SKWRPSIPFV EQLKAFQELI DEGKVRYIGV SNETSYGVME FVHAAKVEGL PKIVSIQNSY SLLVRCRFEI DLVEVCHPNN YNIGLLAYSP
301: LGGGSLSGKY LDINSEAAKR GRLNLFPGYM ERYNRSIAKE ATIEYTKVAK KHGLTLVQLA LGFARDRPFM ASSIVGATSV DQLKEDIDAF VTTERPLPAE
401: VMADIESTFK RYKDPAIL

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.