Factsheet for GSMUA_Achr4P04780_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042008	Potato	cytosol, plastid	71.87	76.0
Solyc06g053600.2.1	Tomato	plastid	71.16	75.06
TraesCS4D01G078200.1	Wheat	plastid	71.87	75.06
TraesCS4A01G235500.1	Wheat	plastid	71.63	74.81
TraesCS4B01G079400.1	Wheat	plastid	71.39	74.57
Os03t0611200-01	Rice	plastid	70.92	74.07
KRH69116	Soybean	plastid	72.1	72.45
EER93819	Sorghum	plastid	68.09	71.82
VIT_05s0049g01130.t01	Wine grape	plastid	70.69	71.53
OQU91377	Sorghum	plastid	66.43	69.38
TraesCS4A01G235300.1	Wheat	plastid	65.48	69.25
TraesCS4B01G079600.1	Wheat	mitochondrion	51.54	69.21
TraesCS4D01G078600.1	Wheat	plastid	66.43	67.87
CDY18231	Canola	cytosol	63.83	65.38
AT1G04420.1	Thale cress	plastid	63.59	65.29
Bra015315.1-P	Field mustard	cytosol	64.07	64.52
HORVU4Hr1G013530.5	Barley	mitochondrion	71.87	62.68
HORVU4Hr1G013600.1	Barley	mitochondrion	29.31	61.69
CDX89825	Canola	plastid	65.72	60.7
Zm00001d033338_P002	Maize	plastid	67.38	60.51
GSMUA_Achr2P02520_001	Banana	extracellular, plasma membrane	40.43	47.9
Zm00001d043151_P001	Maize	plastid	21.28	44.12
GSMUA_Achr5P16010_001	Banana	cytosol	8.27	29.91
GSMUA_Achr9P23530_001	Banana	mitochondrion	20.57	28.71
GSMUA_Achr3P27400_001	Banana	mitochondrion	20.09	28.05
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	9.69	27.15
GSMUA_Achr9P10640_001	Banana	cytosol	21.75	26.36
GSMUA_Achr8P26850_001	Banana	mitochondrion	21.28	25.71
GSMUA_Achr5P16020_001	Banana	cytosol	22.7	24.3
GSMUA_Achr5P03020_001	Banana	cytosol	4.49	22.09
GSMUA_Achr8P20540_001	Banana	cytosol	11.82	21.93
GSMUA_Achr4P31780_001	Banana	mitochondrion	18.44	21.02
GSMUA_Achr3P18270_001	Banana	plastid	18.68	20.9

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G04780_001
EnsemblPlants:GSMUA_Achr4P04780_001	EnsemblPlants:GSMUA_Achr4T04780_001	InterPro:IPR036812	UniProt:M0SL45	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PFAM:PF00248	PRINTS:PR00069	PANTHER:PTHR43364	PANTHER:PTHR43364:SF4	SUPFAM:SSF51430	UniParc:UPI000296C973

Description

Putative Protein tas [Source:GMGC_GENE;Acc:GSMUA_Achr4G04780_001]

Coordinates

chr4:-:3753304..3763433

Molecular Weight (calculated)

47231.5 Da

IEP (calculated)

8.796

GRAVY (calculated)

-0.349

Length

423 amino acids

Sequence
(BLAST)

001: MVTLASAANA MTTTLRSSAP KSNHLSEASC CALLPSTDVS AGVRRQRRRA WPFSIRAKLS GGGENPLQYR KLGDSDLHIS EITLGTMTFG EQNTEKEAHD
101: QLSYAFLHGI NALDTAEMYP VPPRKETQGR TDLYIGSWMK SKPRDKVILA TKVSGYSERS SYQRENAKVL RVDSANIRES VEKSLKRLST DYIDLLQIHW
201: PDRYVPLFGE LTYDSTKWRA SVPFIEQLQA FQELIDEGKV RYIGVSNETS YGVMEFVHAA KVGGLPKIVS IQNSYSLLAR CRFEVDLVEV CHPKNCNIGL
301: LAYSPLGGGT LSGKYLDTNS EAAKSGRLNL FPGYMERYNR SLAKVATEKY IELAKKHGLS PVQLALGFVR DRPFMTSTII GSTNMDQLKE DIDAFSTAPR
401: PLPPEVVDEI ERIFKIYKDP AIV

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.