Factsheet for VIT_05s0020g04130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
peroxisome 1
mitochondrion 2
plastid 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35448	Soybean	nucleus	75.65	75.0
KRH35444	Soybean	cytosol	73.33	73.55
Solyc09g082720.2.1	Tomato	cytosol, plastid	71.88	71.88
VIT_14s0030g02050.t01	Wine grape	cytosol	70.43	70.85
PGSC0003DMT400016484	Potato	cytosol	71.3	70.69
PGSC0003DMT400016488	Potato	mitochondrion	49.28	70.54
Solyc09g082730.2.1	Tomato	cytosol	70.14	69.94
VIT_14s0030g01960.t01	Wine grape	cytosol	68.41	69.62
EER91589	Sorghum	cytosol	66.96	67.74
TraesCS7D01G197100.1	Wheat	cytosol	66.67	67.45
VIT_14s0030g01980.t01	Wine grape	cytosol	66.67	67.25
Os10t0419100-01	Rice	cytosol, plasma membrane	66.67	67.06
VIT_14s0030g02060.t01	Wine grape	peroxisome	67.83	66.67
TraesCS7B01G101300.1	Wheat	cytosol	64.93	66.67
VIT_14s0030g01990.t01	Wine grape	cytosol	67.83	66.67
VIT_14s0030g02020.t01	Wine grape	cytosol	66.96	66.57
TraesCS7A01G195600.1	Wheat	cytosol	65.51	66.28
Os01t0618100-01	Rice	plasma membrane	65.8	65.99
HORVU7Hr1G039930.1	Barley	cytosol	65.22	65.98
TraesCS7B01G090000.1	Wheat	cytosol	65.8	65.42
TraesCS3D01G230600.1	Wheat	cytosol, golgi, unclear	64.64	65.4
HORVU3Hr1G054640.2	Barley	cytosol	64.64	65.4
TraesCS3B01G252400.1	Wheat	cytosol	64.35	65.1
TraesCS3A01G222900.1	Wheat	cytosol, golgi, nucleus	64.06	64.81
TraesCS7A01G185000.1	Wheat	cytosol	64.93	64.74
TraesCS7A01G184900.1	Wheat	cytosol	63.77	64.71
TraesCS7B01G089600.1	Wheat	cytosol	64.64	64.64
VIT_14s0030g01970.t01	Wine grape	cytosol	64.93	64.55
EES03282	Sorghum	cytosol	64.93	64.18
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	63.48	64.04
GSMUA_Achr8P26850_001	Banana	mitochondrion	64.35	63.43
TraesCS7D01G186400.1	Wheat	cytosol	64.35	63.43
OQU87178	Sorghum	cytosol	63.19	63.37
TraesCS7B01G089800.1	Wheat	cytosol	56.52	60.94
HORVU7Hr1G040080.2	Barley	cytosol	12.75	60.27
KXG33406	Sorghum	mitochondrion	55.07	60.13
Os04t0338100-01	Rice	cytosol, nucleus	19.42	59.82
KXG32909	Sorghum	plastid	63.48	57.03
VIT_05s0062g00980.t01	Wine grape	cytosol	52.46	56.92
VIT_05s0062g01000.t01	Wine grape	cytosol	51.59	56.33
VIT_05s0062g00950.t01	Wine grape	cytosol	32.46	56.0
VIT_05s0062g01010.t01	Wine grape	cytosol	49.86	54.43
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	17.39	54.05
Zm00001d011363_P002	Maize	cytosol	53.91	52.25
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	21.16	48.34
Zm00001d032921_P001	Maize	cytosol	63.77	34.98
VIT_12s0028g01100.t01	Wine grape	plastid	28.7	26.98
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	24.93	26.54
VIT_05s0051g00650.t01	Wine grape	mitochondrion	25.22	26.52
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	13.91	26.23
VIT_05s0049g01130.t01	Wine grape	plastid	27.25	22.49

Protein Annotations

EntrezGene:100252909	wikigene:100252909	Gene3D:3.20.20.100	MapMan:50.1.1	ProteinID:CBI26314	ProteinID:CBI26314.3
UniProt:D7T743	EMBL:FN595749	InterPro:IPR036812	EntrezGene:LOC100252909	wikigene:LOC100252909	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PANTHER:PTHR43625	PANTHER:PTHR43625:SF10	SUPFAM:SSF51430	TIGR:TC52521
UniParc:UPI000198328A	ArrayExpress:VIT_05s0020g04130	EnsemblPlantsGene:VIT_05s0020g04130	EnsemblPlants:VIT_05s0020g04130.t01	unigene:Vvi.5437	RefSeq:XP_002283471
RefSeq:XP_002283471.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:5781676..5784239

Molecular Weight (calculated)

38398.5 Da

IEP (calculated)

5.313

GRAVY (calculated)

-0.161

Length

345 amino acids

Sequence
(BLAST)

001: MEDMPQIKIP RVKLGSQGLE VSRLGFGCAG LSGIYNSPLS HEAGCSVIKE AFYKGVTLFD TSDIYGANHD NEIMVGKALK ELPREEIQLA TKFGLQVLEV
101: GKVVIKGTPE YVRDCCEASL KRLGVDYIDL YYQHRVDMSV PIEDTMEELK KLVEEGKIKY IGLSEASVDT IRRAHAVHPI TALQMEYSFW AREIEEDIIP
201: LCRELGIGIV AYSPLGRGFF GGKAVVESLP TQSILTMHPR FTGENLEKNK LIYARLEKLA AKHGCTLPQL ALAWLFHQGD DVVPIPGTTK VKNLDNNIGS
301: LGVKLTEDDL KEICDAVPLD EVNGNRDLSF LFEYNWKLAD TPPKK

Best Arabidopsis Sequence Match ( AT1G60680.1 )
(BLAST)

001: MAEACRVRRM KLGSQGLEVS AQGLGCMALS ARYGAPKPET DAIALLHHAI NSGVTFFDTS DMYGPETNEL LLGKALKDGV KEKVELATKF GFFIVEGEIS
101: EVRGDPEYVR AACEASLKRL DIACIDLYYQ HRIDTRVPIE ITMRELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QIEWSLWSRD AEEDIIPICR
201: ELGIGIVAYS PLGRGFLAAG PKLAENLEND DFRKTLPRFQ QENVDHNKIL FEKVSAMAEK KGCTPAQLAL AWVHHQGDDV CPIPGTTKIE NLNQNIRALS
301: VKLTPEEISE LDSLAKPESV KGERYMASMS TFKNSNTPPL SSWKAT

Arabidopsis Description

AGD2Probable aldo-keto reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84M96]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.