Factsheet for VIT_05s0062g01010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0062g00980.t01	Wine grape	cytosol	83.54	83.02
VIT_05s0062g01000.t01	Wine grape	cytosol	82.59	82.59
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	37.66	78.81
VIT_05s0062g00950.t01	Wine grape	cytosol	48.1	76.0
VIT_14s0030g01980.t01	Wine grape	cytosol	56.33	52.05
VIT_14s0030g02050.t01	Wine grape	cytosol	55.7	51.31
VIT_14s0030g01960.t01	Wine grape	cytosol	54.75	51.03
VIT_14s0030g02020.t01	Wine grape	cytosol	56.01	51.01
VIT_05s0020g04130.t01	Wine grape	cytosol	54.43	49.86
VIT_14s0030g01970.t01	Wine grape	cytosol	54.43	49.57
VIT_14s0030g01990.t01	Wine grape	cytosol	53.48	48.15
VIT_14s0030g02060.t01	Wine grape	peroxisome	53.16	47.86
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	12.03	34.23
VIT_12s0028g01100.t01	Wine grape	plastid	28.48	24.52
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	25.0	24.38
VIT_05s0051g00650.t01	Wine grape	mitochondrion	22.78	21.95
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	12.66	21.86
VIT_05s0049g01130.t01	Wine grape	plastid	28.8	21.77

Protein Annotations

EntrezGene:100258300	wikigene:100258300	Gene3D:3.20.20.100	MapMan:50.1.1	EMBL:AM431946	ProteinID:CAN80303
ProteinID:CAN80303.1	ProteinID:CBI39434	ProteinID:CBI39434.3	UniProt:D7U9M0	EMBL:FN596745	InterPro:IPR036812
EntrezGene:LOC100258300	wikigene:LOC100258300	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PANTHER:PTHR43625
PANTHER:PTHR43625:SF18	SUPFAM:SSF51430	UniParc:UPI0001BE50E5	ArrayExpress:VIT_05s0062g01010	EnsemblPlantsGene:VIT_05s0062g01010	EnsemblPlants:VIT_05s0062g01010.t01
RefSeq:XP_002266277	RefSeq:XP_002266277.1	:	:	:	:

Description

No Description!

Coordinates

chr5:-:19608569..19610214

Molecular Weight (calculated)

34942.0 Da

IEP (calculated)

5.889

GRAVY (calculated)

-0.176

Length

316 amino acids

Sequence
(BLAST)

001: MSAFYGPPKP DEDMIPVIHH AINRGITFLD TSDVYGPFIN EILLGKALKG GMQERVELAT KFGVIIKDGK FEVRGDPAYV RAACEGSLKR LEVDCIDLYY
101: QHRIDTRLPI EVTMGELKKL VEEGKIKYIG LSEASASTIR RAHAVHPITA VQLEWSLWAR DAEEDIIPTC RELGIGIVAY SPLGRGFLSL GAKVAENLSN
201: DDYRKTLPRF QPENIEHNNI LFERVKEIAT RKGCTTSQLA LAWVHHQGDD VCPIPGTTKI GNLDQNIGAL SLTLTPEEMA ELESIASAVA IKSDRFQGTS
301: LTWKASDTPL LASWKA

Best Arabidopsis Sequence Match ( AT1G60680.1 )
(BLAST)

001: MAEACRVRRM KLGSQGLEVS AQGLGCMALS ARYGAPKPET DAIALLHHAI NSGVTFFDTS DMYGPETNEL LLGKALKDGV KEKVELATKF GFFIVEGEIS
101: EVRGDPEYVR AACEASLKRL DIACIDLYYQ HRIDTRVPIE ITMRELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QIEWSLWSRD AEEDIIPICR
201: ELGIGIVAYS PLGRGFLAAG PKLAENLEND DFRKTLPRFQ QENVDHNKIL FEKVSAMAEK KGCTPAQLAL AWVHHQGDDV CPIPGTTKIE NLNQNIRALS
301: VKLTPEEISE LDSLAKPESV KGERYMASMS TFKNSNTPPL SSWKAT

Arabidopsis Description

AGD2Probable aldo-keto reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84M96]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.