Factsheet for VIT_05s0051g00650.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g098150.1.1	Tomato	plastid	92.68	92.12
KRH33472	Soybean	nucleus	92.07	92.07
KRG90245	Soybean	nucleus	92.07	92.07
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	92.38	91.82
Bra030584.1-P	Field mustard	mitochondrion	89.63	89.63
CDX86614	Canola	mitochondrion	89.63	89.63
CDY15518	Canola	mitochondrion	89.33	89.33
CDY18250	Canola	cytosol	88.41	88.41
Bra015342.1-P	Field mustard	cytosol	88.11	88.11
AT1G04690.1	Thale cress	cytosol	88.11	88.11
CDX89797	Canola	cytosol, mitochondrion, plastid	88.11	88.11
TraesCS6D01G378400.1	Wheat	plastid	86.59	86.59
GSMUA_Achr3P27400_001	Banana	mitochondrion	79.88	86.47
Os02t0817500-01	Rice	mitochondrion	85.98	85.98
EES06018	Sorghum	mitochondrion	85.98	85.98
HORVU6Hr1G091250.1	Barley	mitochondrion	85.98	85.98
TraesCS6B01G432900.1	Wheat	mitochondrion	85.67	85.67
GSMUA_Achr9P23530_001	Banana	mitochondrion	78.96	85.48
Zm00001d018485_P002	Maize	mitochondrion	85.37	85.37
Zm00001d051912_P001	Maize	mitochondrion	84.45	84.19
TraesCS6A01G392700.1	Wheat	golgi	85.98	74.41
CDY18564	Canola	extracellular, plasma membrane	35.06	31.68
VIT_05s0062g00950.t01	Wine grape	cytosol	16.16	26.5
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	14.63	26.23
VIT_14s0030g01980.t01	Wine grape	cytosol	26.52	25.44
VIT_05s0020g04130.t01	Wine grape	cytosol	26.52	25.22
VIT_14s0030g02050.t01	Wine grape	cytosol	26.22	25.07
VIT_14s0030g02020.t01	Wine grape	cytosol	26.22	24.78
VIT_14s0030g01970.t01	Wine grape	cytosol	25.91	24.5
VIT_14s0030g01960.t01	Wine grape	cytosol	25.3	24.48
VIT_05s0062g00980.t01	Wine grape	cytosol	23.48	24.21
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	23.78	24.07
VIT_14s0030g01990.t01	Wine grape	cytosol	25.61	23.93
VIT_14s0030g02060.t01	Wine grape	peroxisome	25.3	23.65
VIT_05s0062g01000.t01	Wine grape	cytosol	22.26	23.1
VIT_05s0062g01010.t01	Wine grape	cytosol	21.95	22.78
VIT_05s0049g01130.t01	Wine grape	plastid	28.35	22.25
VIT_12s0028g01100.t01	Wine grape	plastid	23.48	20.98
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	7.01	20.72
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	9.45	20.53
Bra017398.1-P	Field mustard	extracellular	5.18	12.88

Protein Annotations

EntrezGene:100263047	wikigene:100263047	Gene3D:3.20.20.100	MapMan:35.1	ProteinID:CCB57515	ProteinID:CCB57515.1
UniProt:F6HS56	EMBL:FN596241	InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB-rel	EntrezGene:LOC100263047	wikigene:LOC100263047
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR01577	PANTHER:PTHR43150	PANTHER:PTHR43150:SF2
SUPFAM:SSF51430	TIGR:TC59473	UniParc:UPI00015C7CCF	ArrayExpress:VIT_05s0051g00650	EnsemblPlantsGene:VIT_05s0051g00650	EnsemblPlants:VIT_05s0051g00650.t01
unigene:Vvi.765	RefSeq:XP_002285645	RefSeq:XP_002285645.1	:	:	:

Description

No Description!

Coordinates

chr5:+:11503734..11518439

Molecular Weight (calculated)

36595.6 Da

IEP (calculated)

6.916

GRAVY (calculated)

-0.317

Length

328 amino acids

Sequence
(BLAST)

001: MQYRNLGRSG LKVSQLSYGA WVSFGNQLDV KEAKSLLQCC RDNGVNFFDN AEVYANGRAE EIMGQAIREL GWKRSDVVVS TKIFWGGSGP NDKGLSRKHI
101: IEGTKASLKR LDMEYVDVIY CHRPDSSTPI EETVRAMNYV IDHGWAFYWG TSEWSAQQIT EAWGVAERLD LVGPIVEQPE YNLLSRHKVE CEYLPLYSNY
201: GIGLTTWSPL ASGVLTGKYN KGTIPQDSRF ALENYKNLAS RSLVDDVLRK VNGLKPIADE LGVPLSQLAI AWCAANPNVS SVITGATKES QIQENMKAID
301: VIPLLTPTVL EKIEAVVQSK PKRPDSYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.