Factsheet for Os02t0817500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

mitochondrion: 15069638
nucleus: 19621931
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 15069638 doi

N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018485_P002	Maize	mitochondrion	94.82	94.82
EES06018	Sorghum	mitochondrion	93.6	93.6
Zm00001d051912_P001	Maize	mitochondrion	93.6	93.31
TraesCS6D01G378400.1	Wheat	plastid	92.38	92.38
TraesCS6B01G432900.1	Wheat	mitochondrion	91.46	91.46
HORVU6Hr1G091250.1	Barley	mitochondrion	91.46	91.46
CDY15518	Canola	mitochondrion	86.28	86.28
Bra030584.1-P	Field mustard	mitochondrion	85.98	85.98
CDX86614	Canola	mitochondrion	85.98	85.98
VIT_05s0051g00650.t01	Wine grape	mitochondrion	85.98	85.98
KRG90245	Soybean	nucleus	85.98	85.98
KRH33472	Soybean	nucleus	85.98	85.98
GSMUA_Achr9P23530_001	Banana	mitochondrion	78.96	85.48
CDY18250	Canola	cytosol	85.37	85.37
Bra015342.1-P	Field mustard	cytosol	85.06	85.06
AT1G04690.1	Thale cress	cytosol	85.06	85.06
CDX89797	Canola	cytosol, mitochondrion, plastid	85.06	85.06
Solyc12g098150.1.1	Tomato	plastid	85.37	84.85
GSMUA_Achr3P27400_001	Banana	mitochondrion	78.35	84.82
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	85.06	84.55
TraesCS6A01G392700.1	Wheat	golgi	91.77	79.42
CDY18564	Canola	extracellular, plasma membrane	32.62	29.48
Os11t0645200-01	Rice	extracellular	27.74	26.84
Os04t0338100-01	Rice	cytosol, nucleus	8.84	25.89
Os03t0611200-01	Rice	plastid	31.71	25.68
Os10t0419100-01	Rice	cytosol, plasma membrane	26.22	25.07
Os01t0618100-01	Rice	plasma membrane	26.22	25.0
Os04t0339400-01	Rice	plasma membrane	26.52	24.51
Os04t0337800-00	Rice	mitochondrion	18.9	24.03
Os04t0337500-01	Rice	plasma membrane	24.7	23.14
Os04t0338000-01	Rice	plasma membrane	24.7	23.08
Os10t0517400-01	Rice	plasma membrane	24.7	21.6
Os07t0143000-01	Rice	mitochondrion, plastid	23.78	20.69
Os07t0142900-01	Rice	plastid	23.48	20.48
Bra017398.1-P	Field mustard	extracellular	4.88	12.12

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	EntrezGene:4331148	EMBL:AK072707	EMBL:AK104135	ProteinID:BAD21522.1
ProteinID:BAD22023.1	ProteinID:BAF10435.1	ProteinID:BAS81586.1	ProteinID:EEE58046.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005244	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009506	GO:GO:0016020	GO:GO:0034220	GO:GO:0034765
InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB-rel	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	EnsemblPlantsGene:Os02g0817500	EnsemblPlants:Os02t0817500-01
PFAM:PF00248	PRINTS:PR01577	PANTHER:PTHR43150	UniProt:Q40648	SUPFAM:SSF51430	EMBL:U46758
UniParc:UPI0000377C16	RefSeq:XP_015626381.1	:	:	:	:

Description

K+ channel beta 1 subunit, K+ Channel beta SubunitPotassium channel, voltage-dependent, beta subunit, KCNAB-related domain containing protein. (Os02t0817500-01);Potassium channel, voltage-dependent, beta subunit, KCNAB-related domain containing protein. (Os02t0817500-02)

Coordinates

chr2:+:35067978..35072576

Molecular Weight (calculated)

36451.4 Da

IEP (calculated)

7.494

GRAVY (calculated)

-0.270

Length

328 amino acids

Sequence
(BLAST)

001: MQYKNLGRSG LRVSQLSYGA WVTFGNQLDV KEAKALLQAC RDAGVNFFDN AEVYANGRAE EIMGQAMRDL GWRRSDVVVS TKLFWGGQGP NDKGLSRKHI
101: VEGLRGSLKR LDMDYVDVVY CHRPDATTPV EETVRAMNWV IDHGMAFYWG TSEWSAQQIT EAWSVANRLD LVGPIVEQPE YNLFSRHKVE SEFLPLYSTY
201: GLGLTTWSPL ASGVLTGKYA KGNIPADSRF ALENYKNLAN RSLVDDTLRK VNGLKPIASE LGVSLAQLAI AWCASNPNVS SVITGATKEN QIVENMKALD
301: VIPLLTPEVV DKIEAVVQSK PKRTESYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.