Factsheet for Os04t0337800-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16010_001	Banana	cytosol	33.33	73.5
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	41.09	70.2
TraesCS5B01G331500.2	Wheat	cytosol	34.5	64.96
Bra027135.1-P	Field mustard	cytosol, mitochondrion, nucleus	63.18	63.92
HORVU6Hr1G026770.1	Barley	extracellular, mitochondrion, plastid	28.68	61.67
Bra027139.1-P	Field mustard	cytosol	58.91	60.08
Bra027138.1-P	Field mustard	cytosol	57.75	59.13
Os04t0338000-01	Rice	plasma membrane	79.07	58.12
Os04t0337500-01	Rice	plasma membrane	78.29	57.71
EER97210	Sorghum	cytosol, mitochondrion	72.87	53.87
KRH45230	Soybean	nucleus	69.38	52.34
KRH55515	Soybean	cytosol	68.99	51.9
Os04t0339400-01	Rice	plasma membrane	71.32	51.83
OQU82703	Sorghum	plastid	30.23	50.65
AT1G60750.1	Thale cress	cytosol	63.18	49.39
KRH55516	Soybean	cytosol	64.73	48.55
Bra027140.1-P	Field mustard	cytosol, nucleus, peroxisome	62.4	48.2
AT1G60710.1	Thale cress	cytosol	64.34	48.12
Zm00001d006365_P001	Maize	mitochondrion	75.19	47.67
AT1G10810.1	Thale cress	mitochondrion, peroxisome, plastid	63.18	47.38
CDY70614	Canola	cytosol	61.63	47.18
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	27.52	47.02
TraesCS6D01G127900.1	Wheat	mitochondrion	65.5	46.94
Bra031486.1-P	Field mustard	cytosol	60.85	46.73
TraesCS5A01G331200.1	Wheat	cytosol	41.47	46.32
AT1G60690.1	Thale cress	cytosol	61.63	46.09
Bra031485.1-P	Field mustard	cytosol, mitochondrion	63.95	45.83
GSMUA_Achr5P16020_001	Banana	cytosol	70.16	45.82
Bra027134.1-P	Field mustard	cytosol	60.47	45.75
AT1G60680.1	Thale cress	cytosol, mitochondrion	60.85	45.38
AT1G60730.3	Thale cress	cytosol	63.95	45.21
Bra027142.1-P	Field mustard	cytosol	61.63	43.32
Solyc09g097950.1.1	Tomato	cytosol	24.42	42.28
HORVU6Hr1G026790.4	Barley	plastid	40.31	36.88
Os01t0618100-01	Rice	plasma membrane	47.67	35.76
Os10t0419100-01	Rice	cytosol, plasma membrane	46.9	35.28
CDY34675	Canola	cytosol	28.29	34.6
CDY34139	Canola	cytosol	33.72	34.39
Os04t0338100-01	Rice	cytosol, nucleus	12.02	27.68
PGSC0003DMT400042838	Potato	cytosol	41.86	24.05
Os07t0143000-01	Rice	mitochondrion, plastid	30.23	20.69
Os07t0142900-01	Rice	plastid	28.68	19.68
Os02t0817500-01	Rice	mitochondrion	24.03	18.9
Os10t0517400-01	Rice	plasma membrane	26.74	18.4
Os03t0611200-01	Rice	plastid	25.58	16.3
Os11t0645200-01	Rice	extracellular	20.93	15.93
KRG94634	Soybean	cytosol	1.16	4.55

Protein Annotations

EnsemblPlants:Os04t0337800-00	EnsemblPlantsGene:Os04g0337800	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43625	PANTHER:PTHR43625:SF18	PFAM:PF00248	ProteinID:BAS88647.1	SEG:seg	SUPFAM:SSF51430
UniParc:UPI000393A316	UniProt:A0A0P0W8U8	MapMan:35.1	:	:	:

Description

Similar to IN2-2 protein. (Os04t0337800-00)

Coordinates

chr4:+:15904657..15911580

Molecular Weight (calculated)

27789.2 Da

IEP (calculated)

6.089

GRAVY (calculated)

-0.166

Length

258 amino acids

Sequence
(BLAST)

001: MAPAAPATAA VRRVKLGSQG LEVSAQGLGC MGMSAFHGPS KPEADMVALI HHAVAAGVTL LDTADIYGPH ANEALLGKAL QVGSVRDNVA LATKFGKFLA
101: DGKVGIRGDP AYVRAACEGS LQRLGVDCID LYYQHRVDKK VPIEVTNLPR FQPENLEKNA KIFDRVNAMA MRKGCTAAQF ALAWIHHKGD DVCPIPGTTK
201: IENFDQNVGA LSLELTRDEM AELESYAAAA DVHGDWYAQM ANTWKDCETP PLSSWKEE

Best Arabidopsis Sequence Match ( AT1G60730.2 )
(BLAST)

001: MAEACGVRRI KLGSQGLEVS AQGLGCMGLS AFYGTPKPET EAIALIHHAI HSGVTFLDTS DIYGPETNEL LLSKALKDGV REKVELATKY GIRYAEGKVE
101: FKGDPAYVRA ACEASLMRVD VACIDLYYQH RIDTRVPIEI TVSTLLVNLP SWFCNFQMKW KLYSSSHFSV SFTHVARDML GLI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:TAIR;Acc:AT1G60730]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.