Factsheet for Os04t0338000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G331500.2	Wheat	cytosol	34.19	87.59
Os04t0337500-01	Rice	plasma membrane	83.76	84.0
EER97210	Sorghum	cytosol, mitochondrion	82.05	82.52
KRH45230	Soybean	nucleus	79.2	81.29
KRH55515	Soybean	cytosol	78.63	80.47
Os04t0337800-00	Rice	mitochondrion	58.12	79.07
GSMUA_Achr5P16010_001	Banana	cytosol	26.21	78.63
Os04t0339400-01	Rice	plasma membrane	78.92	78.03
KRH55516	Soybean	cytosol	76.07	77.62
AT1G60750.1	Thale cress	cytosol	72.65	77.27
AT1G60710.1	Thale cress	cytosol	75.5	76.81
Os04t0338100-01	Rice	cytosol, nucleus	24.5	76.79
Bra027140.1-P	Field mustard	cytosol, nucleus, peroxisome	72.65	76.35
AT1G10810.1	Thale cress	mitochondrion, peroxisome, plastid	73.5	75.0
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	32.19	74.83
Bra031485.1-P	Field mustard	cytosol, mitochondrion	76.07	74.17
AT1G60680.1	Thale cress	cytosol, mitochondrion	72.93	73.99
AT1G60690.1	Thale cress	cytosol	72.08	73.33
CDY70614	Canola	cytosol	70.37	73.29
Bra031486.1-P	Field mustard	cytosol	69.8	72.92
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	31.34	72.85
AT1G60730.3	Thale cress	cytosol	75.21	72.33
KRG94634	Soybean	cytosol	13.39	71.21
Bra027134.1-P	Field mustard	cytosol	68.95	70.97
GSMUA_Achr5P16020_001	Banana	cytosol	79.77	70.89
TraesCS6D01G127900.1	Wheat	mitochondrion	72.36	70.56
Zm00001d006365_P001	Maize	mitochondrion	81.2	70.02
Bra027142.1-P	Field mustard	cytosol	72.65	69.48
CDY34139	Canola	cytosol	49.86	69.17
Bra027135.1-P	Field mustard	cytosol, mitochondrion, nucleus	49.86	68.63
Bra027138.1-P	Field mustard	cytosol	49.0	68.25
CDY34675	Canola	cytosol	41.03	68.25
HORVU6Hr1G026770.1	Barley	extracellular, mitochondrion, plastid	23.08	67.5
Bra027139.1-P	Field mustard	cytosol	47.86	66.4
TraesCS5A01G331200.1	Wheat	cytosol	43.59	66.23
HORVU6Hr1G026790.4	Barley	plastid	52.71	65.6
OQU82703	Sorghum	plastid	26.21	59.74
Os10t0419100-01	Rice	cytosol, plasma membrane	56.41	57.73
Os01t0618100-01	Rice	plasma membrane	55.27	56.4
Solyc09g097950.1.1	Tomato	cytosol	20.23	47.65
PGSC0003DMT400042838	Potato	cytosol	54.99	42.98
Os07t0142900-01	Rice	plastid	28.77	26.86
Os07t0143000-01	Rice	mitochondrion, plastid	28.21	26.26
Os03t0611200-01	Rice	plastid	28.77	24.94
Os02t0817500-01	Rice	mitochondrion	23.08	24.7
Os10t0517400-01	Rice	plasma membrane	26.21	24.53
Os11t0645200-01	Rice	extracellular	23.65	24.48

Protein Annotations

Gene3D:3.20.20.100	EntrezGene:4335512	MapMan:50.1.1	EMBL:AK061686	EMBL:AK099774	ProteinID:BAF14408.1
ProteinID:BAS88648.1	ProteinID:CAE01603.2	ProteinID:CAE03308.2	ProteinID:EAZ30267.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	EnsemblPlantsGene:Os04g0338000	EnsemblPlants:Os04t0338000-01	PFAM:PF00248	PANTHER:PTHR43625	PANTHER:PTHR43625:SF18
UniProt:Q7XT99	SUPFAM:SSF51430	UniParc:UPI00001B0C53	RefSeq:XP_015635955.1	SEG:seg	:

Description

Similar to IN2-2 protein. (Os04t0338000-01)

Coordinates

chr4:+:15915699..15918901

Molecular Weight (calculated)

38235.7 Da

IEP (calculated)

6.427

GRAVY (calculated)

-0.261

Length

351 amino acids

Sequence
(BLAST)

001: MAAAAPATAA VRRMKLGSQG LEVSAQGLGC MGMSAFYGPP KPEPDMVALI HHAVAAGVTL LDTSDIYGPH TNELLLGKAL QGGVRDKVEL ATKFGIAFED
101: GKRDVRGDPA YVRAACEGSL RRLGVDSIDL YYQHRVDKKV PIEVTIGELK KLVEEGKIKY IGLSEASAST IRRAHAVHPI TAVQLEWSLW SRDVEEDIIP
201: TCRELGIGIV AYSPLGRGFF SAGAKLVESL SDQDFRKHIP RFQQENLEKN AEIFERVNAM AARKGCTPSQ LALAWVHHQG SDVCPIPGTT KIENLNQNIG
301: ALSVKLTPEE MAELESYAST DDVRGDRYPQ AMANTTWQNS ETPPLSSWKA Q

Best Arabidopsis Sequence Match ( AT1G60710.1 )
(BLAST)

001: MAEACGVRRM KLGSQGLEVS AQGLGCMGLS AFYGAPKPEN EAIALIHHAI HSGVTLLDTS DIYGPETNEV LLGKALKDGV REKVELATKF GISYAEGKRE
101: VRGDPEYVRA ACEASLKRLD IACIDLYYQH RVDTRVPIEI TMGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITAVQ IEWSLWTRDV EEEIIPTCRE
201: LGIGIVAYSP LGRGFFASGP KLVENLEKDD FRKALPRFQE ENLDHNKIVY EKVCAISEKK GCTPGQLALA WVHHQGDDVC PIPGTTKIEN LKQNIGALSV
301: KLTPEEMTEL EAIAQPGFVK GDRYSNMIPT FKNAETPPLS AWKAA

Arabidopsis Description

ATB2Probable aldo-keto reductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.