CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G026770.1	Barley	extracellular, mitochondrion, plastid	44.81	57.5
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	49.35	50.33
GSMUA_Achr5P16010_001	Banana	cytosol	35.71	47.01
HORVU2Hr1G082740.6	Barley	cytosol, plastid	51.95	44.44
TraesCS5B01G331500.2	Wheat	cytosol	38.96	43.8
Solyc09g097950.1.1	Tomato	cytosol	36.36	37.58
TraesCS5A01G331200.1	Wheat	cytosol	51.95	34.63
Os04t0337800-00	Rice	mitochondrion	50.65	30.23
Bra027135.1-P	Field mustard	cytosol, mitochondrion, nucleus	46.75	28.24
Bra027139.1-P	Field mustard	cytosol	44.16	26.88
Os04t0338000-01	Rice	plasma membrane	59.74	26.21
Bra027138.1-P	Field mustard	cytosol	42.21	25.79
EER97210	Sorghum	cytosol, mitochondrion	57.79	25.5
EER87770	Sorghum	cytosol	55.84	24.86
Os04t0337500-01	Rice	plasma membrane	55.84	24.57
CDY34675	Canola	cytosol	33.12	24.17
AT1G60750.1	Thale cress	cytosol	51.3	23.94
Bra027140.1-P	Field mustard	cytosol, nucleus, peroxisome	50.65	23.35
AT1G60710.1	Thale cress	cytosol	51.95	23.19
EER97869	Sorghum	cytosol	51.95	22.66
Bra031486.1-P	Field mustard	cytosol	48.7	22.32
CDY70614	Canola	cytosol	48.7	22.26
AT1G60690.1	Thale cress	cytosol	49.35	22.03
Bra027134.1-P	Field mustard	cytosol	48.7	21.99
OQU76240	Sorghum	mitochondrion	50.65	21.97
KXG19188	Sorghum	cytosol	54.55	21.59
GSMUA_Achr5P16020_001	Banana	cytosol	55.19	21.52
AT1G10810.1	Thale cress	mitochondrion, peroxisome, plastid	48.05	21.51
AT1G60680.1	Thale cress	cytosol, mitochondrion	48.05	21.39
AT1G60730.3	Thale cress	cytosol	50.65	21.37
Bra027142.1-P	Field mustard	cytosol	50.65	21.25
Bra031485.1-P	Field mustard	cytosol, mitochondrion	49.35	21.11
EER91589	Sorghum	cytosol	42.86	19.35
OQU87178	Sorghum	cytosol	40.26	18.02
EES03282	Sorghum	cytosol	40.26	17.77
KXG32909	Sorghum	plastid	42.21	16.93
PGSC0003DMT400042838	Potato	cytosol	40.26	13.81
KXG33406	Sorghum	mitochondrion	25.97	12.66
CDY34139	Canola	cytosol	18.18	11.07
KXG26676	Sorghum	mitochondrion, plastid	24.03	9.71
EER95858	Sorghum	mitochondrion	22.73	9.28
EER93936	Sorghum	plastid	20.78	8.63
EES06018	Sorghum	mitochondrion	18.18	8.54
OQU91377	Sorghum	plastid	20.78	7.9
EER93819	Sorghum	plastid	19.48	7.48
HORVU6Hr1G026790.4	Barley	plastid	12.34	6.74
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	22.73	6.04
OQU82702	Sorghum	mitochondrion	3.25	4.31
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	1.3	1.32

Protein Annotations

EnsemblPlants:OQU82703	EnsemblPlantsGene:SORBI_3005G008301	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43625	PANTHER:PTHR43625:SF18	PFAM:PF00248	ProteinID:OQU82703	ProteinID:OQU82703.1	SEG:seg
SUPFAM:SSF51430	UniParc:UPI000B8BA4A4	UniProt:A0A1Z5RG01	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:-:648015..648603

Molecular Weight (calculated)

15991.3 Da

IEP (calculated)

10.115

GRAVY (calculated)

0.036

Length

154 amino acids

Sequence
(BLAST)

001: MAAAAASVVS SRVMVPRMKL GSQGLEVSAL GIGCMGMSFA YGPPKPEPDM VRLIHHAVVA AGVTFLDTSD FYGPHTNELL LGKALQLQAA GGVVRDKVQL
101: ATKFGILYVD GKQGRCTATR RTCGRRARPA SGGSASTASI STTNTASTPG YQFD

Best Arabidopsis Sequence Match ( AT1G60730.2 )
(BLAST)

001: MAEACGVRRI KLGSQGLEVS AQGLGCMGLS AFYGTPKPET EAIALIHHAI HSGVTFLDTS DIYGPETNEL LLSKALKDGV REKVELATKY GIRYAEGKVE
101: FKGDPAYVRA ACEASLMRVD VACIDLYYQH RIDTRVPIEI TVSTLLVNLP SWFCNFQMKW KLYSSSHFSV SFTHVARDML GLI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:TAIR;Acc:AT1G60730]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.