CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003086_P001	Maize	plastid	94.49	96.26
Os07t0142900-01	Rice	plastid	88.19	89.36
TraesCS2D01G254700.1	Wheat	cytosol, mitochondrion	85.04	86.63
TraesCS2B01G267900.1	Wheat	mitochondrion	84.78	86.36
TraesCS2A01G254200.1	Wheat	mitochondrion	84.51	86.1
HORVU2Hr1G060730.2	Barley	cytosol, mitochondrion	85.04	85.71
EER95858	Sorghum	mitochondrion	73.49	74.27
GSMUA_Achr4P31780_001	Banana	mitochondrion	69.82	71.7
Solyc07g043570.2.1	Tomato	plastid	66.4	71.27
PGSC0003DMT400041157	Potato	plastid	68.24	70.84
VIT_12s0028g01100.t01	Wine grape	plastid	67.72	70.3
KRH45977	Soybean	plastid	67.45	69.84
KRG99028	Soybean	plastid	66.93	69.29
AT1G06690.1	Thale cress	plastid	66.4	67.11
CDY15588	Canola	plastid	66.14	66.84
CDX86514	Canola	plastid	65.88	66.58
Bra030661.1-P	Field mustard	plastid	65.62	66.31
EER93936	Sorghum	plastid	36.48	37.47
OQU87178	Sorghum	cytosol	27.3	30.23
EER91589	Sorghum	cytosol	27.03	30.21
EES03282	Sorghum	cytosol	27.3	29.8
OQU76240	Sorghum	mitochondrion	27.03	29.01
EER87770	Sorghum	cytosol	26.25	28.9
EER97869	Sorghum	cytosol	25.98	28.05
EER97210	Sorghum	cytosol, mitochondrion	25.2	27.51
KXG33406	Sorghum	mitochondrion	22.05	26.58
KXG32909	Sorghum	plastid	26.77	26.56
KXG19188	Sorghum	cytosol	26.77	26.22
EES06018	Sorghum	mitochondrion	21.26	24.7
OQU82703	Sorghum	plastid	9.71	24.03
OQU82702	Sorghum	mitochondrion	6.82	22.41
EER93819	Sorghum	plastid	21.0	19.95
OQU91377	Sorghum	plastid	20.73	19.51
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	23.62	15.54

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	UniProt:A0A1B6PLX6	InterPro:Aldo/ket_reductase_CS	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	EnsemblPlants:KXG26676
ProteinID:KXG26676	ProteinID:KXG26676.1	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	ScanProsite:PS00062
PANTHER:PTHR43625	PANTHER:PTHR43625:SF16	EnsemblPlantsGene:SORBI_3006G140700	SUPFAM:SSF51430	UniParc:UPI0001C804F0	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:50307378..50311771

Molecular Weight (calculated)

41117.0 Da

IEP (calculated)

8.014

GRAVY (calculated)

-0.276

Length

381 amino acids

Sequence
(BLAST)

001: MALQVTGGVG CCCPRPQPGC GGRRLAQAAA ALCRPPRAVA SSGTTTTVVE EDEGKVRLGG SSVAVTKLGI GAWSWGDTTY WNDSEWDDRR LREAQDAFDA
101: SIDNGMTFFD TAEVYGTALM GAVNSESLLG GFIKERQQKD QIEVAVATKF AALPWRFGRG SVLSALKKSL DRLGLSSVEL YQLHWPGIWG NEGYLDGLAD
201: AYEQGLVKAV GVSNYNEKRL RDAHARLKKR GVPLAANQVN YSLIYRTPEL NGVKAACDEL GITLIAYSPI AQGVLTGKYT PEKPPTGPRA NTYTPEFLTK
301: LQPLMNRIKE IGASYGKSPT QVSLNWLTCQ GNVVPIPGAK NASQAKEFAG ALGWSLTGDE VEELRTLARE IKGIKMPIEE S

Best Arabidopsis Sequence Match ( AT1G06690.1 )
(BLAST)

001: MAMATHFTFP FNYVVSEGSH GRRSFVRKLV RAVASGDSVA PAISEESKVK LGGSDLKVTK LGIGVWSWGD NSYWNDFQWD DRKLKAAKGA FDTSLDNGID
101: FFDTAEVYGS KFSLGAISSE TLLGRFIRER KERYPGAEVS VATKFAALPW RFGRESVVTA LKDSLSRLEL SSVDLYQLHW PGLWGNEGYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYE RLKKRGIPLA SNQVNYSLIY RAPEQTGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP SGPRGRIYTR EFLTKLQPLL
301: NRIKQIGENY SKTPTQIALN WLVAQGNVIP IPGAKNAEQA KEFAGAIGWS LTDNEVSELR SLASEIKPVV GFPVEYL

Arabidopsis Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.