CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0143000-01	Rice	mitochondrion, plastid	86.21	86.21
Zm00001d007858_P001	Maize	plastid	93.63	85.89
TraesCS2D01G254500.1	Wheat	mitochondrion, plastid	82.49	83.83
HORVU2Hr1G060710.1	Barley	mitochondrion, plastid	82.49	83.83
TraesCS2A01G254100.1	Wheat	mitochondrion, plastid	82.23	83.56
TraesCS2B01G268000.1	Wheat	mitochondrion, plastid	81.7	83.02
Solyc07g043570.2.1	Tomato	plastid	71.88	76.34
GSMUA_Achr4P31780_001	Banana	mitochondrion	75.07	76.28
VIT_12s0028g01100.t01	Wine grape	plastid	74.01	76.02
PGSC0003DMT400041157	Potato	plastid	74.01	76.02
KXG26676	Sorghum	mitochondrion, plastid	74.27	73.49
CDY15588	Canola	plastid	73.21	73.21
Bra030661.1-P	Field mustard	plastid	72.94	72.94
CDX86514	Canola	plastid	72.94	72.94
AT1G06690.1	Thale cress	plastid	72.94	72.94
KRG99028	Soybean	plastid	70.56	72.28
KRH45977	Soybean	plastid	70.29	72.01
EER93936	Sorghum	plastid	36.6	37.2
EER91589	Sorghum	cytosol	27.32	30.21
OQU87178	Sorghum	cytosol	27.06	29.65
OQU76240	Sorghum	mitochondrion	27.85	29.58
EER87770	Sorghum	cytosol	27.06	29.48
EES03282	Sorghum	cytosol	27.06	29.23
EER97869	Sorghum	cytosol	25.99	27.76
EER97210	Sorghum	cytosol, mitochondrion	25.46	27.51
KXG19188	Sorghum	cytosol	27.59	26.74
KXG32909	Sorghum	plastid	26.79	26.3
OQU82702	Sorghum	mitochondrion	7.96	25.86
KXG33406	Sorghum	mitochondrion	21.22	25.32
EES06018	Sorghum	mitochondrion	21.49	24.7
OQU82703	Sorghum	plastid	9.28	22.73
EER93819	Sorghum	plastid	20.42	19.2
OQU91377	Sorghum	plastid	19.36	18.02
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	23.61	15.37

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	EntrezGene:8086398	InterPro:Aldo/ket_reductase_CS	UniProt:C5X9G4	EnsemblPlants:EER95858
ProteinID:EER95858	ProteinID:EER95858.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248
ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF22	EnsemblPlantsGene:SORBI_3002G030900	SUPFAM:SSF51430	unigene:Sbi.11547
UniParc:UPI0001A82E9F	RefSeq:XP_002459337.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:2819007..2822634

Molecular Weight (calculated)

40858.8 Da

IEP (calculated)

9.200

GRAVY (calculated)

-0.221

Length

377 amino acids

Sequence
(BLAST)

001: MITGALQVAA GGQPLLLTRR GQQRRRVFRP PQAVASDAAA AATANEEGGK VALGGSGVAV TKLGVGAWSW GDTTYWNEFQ WDDRKLKAAK GAFDASIDCG
101: ITFFDTAEVY GAGISGAINS ESLLGRFIKE RQQKEQVDVA IATKFAALPW RFGRGSVICA LKASLDRLGV SSVELYQLHW PGIWGNEDYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYQ RLKKRGIPLA SNQVNYSLIY RNPEENGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP KGPRGRIYTP EFLTKLQPLI
301: NRIKEIGESY GRTSTQVVLN WLVCQGNVVP IPGAKNAEQA REFAGALGWS LTADEVEELR SMARQVKPVI GFPVEKL

Best Arabidopsis Sequence Match ( AT1G06690.1 )
(BLAST)

001: MAMATHFTFP FNYVVSEGSH GRRSFVRKLV RAVASGDSVA PAISEESKVK LGGSDLKVTK LGIGVWSWGD NSYWNDFQWD DRKLKAAKGA FDTSLDNGID
101: FFDTAEVYGS KFSLGAISSE TLLGRFIRER KERYPGAEVS VATKFAALPW RFGRESVVTA LKDSLSRLEL SSVDLYQLHW PGLWGNEGYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYE RLKKRGIPLA SNQVNYSLIY RAPEQTGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP SGPRGRIYTR EFLTKLQPLL
301: NRIKQIGENY SKTPTQIALN WLVAQGNVIP IPGAKNAEQA KEFAGAIGWS LTDNEVSELR SLASEIKPVV GFPVEYL

Arabidopsis Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.