Factsheet for Zm00001d007858_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95858	Sorghum	mitochondrion	85.89	93.63
Os07t0143000-01	Rice	mitochondrion, plastid	78.35	85.41
TraesCS2D01G254500.1	Wheat	mitochondrion, plastid	75.91	84.1
TraesCS2A01G254100.1	Wheat	mitochondrion, plastid	75.91	84.1
HORVU2Hr1G060710.1	Barley	mitochondrion, plastid	75.43	83.56
TraesCS2B01G268000.1	Wheat	mitochondrion, plastid	75.43	83.56
Solyc07g043570.2.1	Tomato	plastid	65.94	76.34
PGSC0003DMT400041157	Potato	plastid	67.88	76.02
VIT_12s0028g01100.t01	Wine grape	plastid	67.4	75.48
GSMUA_Achr4P31780_001	Banana	mitochondrion	67.4	74.66
Zm00001d003086_P001	Maize	plastid	67.15	73.8
CDY15588	Canola	plastid	66.42	72.41
Bra030661.1-P	Field mustard	plastid	66.18	72.15
CDX86514	Canola	plastid	66.18	72.15
AT1G06690.1	Thale cress	plastid	65.94	71.88
KRG99028	Soybean	plastid	63.99	71.47
KRH45977	Soybean	plastid	63.75	71.2
Zm00001d031666_P002	Maize	extracellular	25.55	30.35
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	24.57	29.53
Zm00001d043967_P001	Maize	extracellular	8.52	29.17
Zm00001d036024_P001	Maize	extracellular, mitochondrion	25.3	26.26
Zm00001d006365_P001	Maize	mitochondrion	25.06	25.31
Zm00001d018485_P002	Maize	mitochondrion	19.95	25.0
Zm00001d011363_P002	Maize	cytosol	21.17	24.44
Zm00001d051912_P001	Maize	mitochondrion	19.46	24.32
Zm00001d031970_P001	Maize	cytosol	12.17	22.42
Zm00001d033338_P002	Maize	plastid	19.46	16.99
Zm00001d032921_P001	Maize	cytosol	25.55	16.69
Zm00001d043151_P001	Maize	plastid	5.6	11.27

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	UniProt:A0A1D6F9C3	InterPro:Aldo/ket_reductase_CS	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	ProteinID:ONM27749.1	PFAM:PF00248	ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF22
SUPFAM:SSF51430	UniParc:UPI000844EF26	EnsemblPlantsGene:Zm00001d007858	EnsemblPlants:Zm00001d007858_P001	EnsemblPlants:Zm00001d007858_T001	SEG:seg

Description

Pyridoxal reductase chloroplastic

Coordinates

chr2:+:241034298..241037375

Molecular Weight (calculated)

44878.8 Da

IEP (calculated)

9.791

GRAVY (calculated)

-0.212

Length

411 amino acids

Sequence
(BLAST)

001: MITALQVSGG GLPLLFARRR RRAFRPPQAV ASDAAAAAEG TAREDGGKVA LGGSGVAVTK LGVGAWSWGD TTYWNEFRWD DTKLKAAKGA FDASIDCGIT
101: FFDTAEVYGA GVRIRAWKLD DALRPYLTTT RHKVNLTLLP NVFCRHQVSG AINSESLLGR FIKERQRKEQ VDVAVATKFA ALPWRFGRGS VICALKASLD
201: RLGVSSVELY QLHWPGIWGN EDYLDGLGDA VEQGLVKAVG VSNYSEKRLR DAYERLRKRG VPLASNQVNY SLIYRNPEEN GVKAACDELG VTLIAYSPIA
301: QGALTGKYTP ESPPKGPRGR IYTPEFLTKL QPLINRIKEI GGSYGRTSTQ VVLNWLVCQG NVVPIPGAKN AEQAREFAGA LGWSLAPDEV EELRSMARQV
401: KPVIGFPVEK L

Best Arabidopsis Sequence Match ( AT1G06690.1 )
(BLAST)

001: MAMATHFTFP FNYVVSEGSH GRRSFVRKLV RAVASGDSVA PAISEESKVK LGGSDLKVTK LGIGVWSWGD NSYWNDFQWD DRKLKAAKGA FDTSLDNGID
101: FFDTAEVYGS KFSLGAISSE TLLGRFIRER KERYPGAEVS VATKFAALPW RFGRESVVTA LKDSLSRLEL SSVDLYQLHW PGLWGNEGYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYE RLKKRGIPLA SNQVNYSLIY RAPEQTGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP SGPRGRIYTR EFLTKLQPLL
301: NRIKQIGENY SKTPTQIALN WLVAQGNVIP IPGAKNAEQA KEFAGAIGWS LTDNEVSELR SLASEIKPVV GFPVEYL

Arabidopsis Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.