Factsheet for Zm00001d018485_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051912_P001	Maize	mitochondrion	97.26	96.96
EES06018	Sorghum	mitochondrion	96.34	96.34
Os02t0817500-01	Rice	mitochondrion	94.82	94.82
TraesCS6D01G378400.1	Wheat	plastid	92.99	92.99
TraesCS6B01G432900.1	Wheat	mitochondrion	92.68	92.68
HORVU6Hr1G091250.1	Barley	mitochondrion	92.07	92.07
KRG90245	Soybean	nucleus	86.28	86.28
KRH33472	Soybean	nucleus	86.28	86.28
CDY15518	Canola	mitochondrion	85.98	85.98
GSMUA_Achr3P27400_001	Banana	mitochondrion	79.27	85.81
GSMUA_Achr9P23530_001	Banana	mitochondrion	79.27	85.81
CDX86614	Canola	mitochondrion	85.67	85.67
Bra030584.1-P	Field mustard	mitochondrion	85.67	85.67
VIT_05s0051g00650.t01	Wine grape	mitochondrion	85.37	85.37
AT1G04690.1	Thale cress	cytosol	85.37	85.37
CDY18250	Canola	cytosol	85.06	85.06
Bra015342.1-P	Field mustard	cytosol	84.76	84.76
CDX89797	Canola	cytosol, mitochondrion, plastid	84.76	84.76
Solyc12g098150.1.1	Tomato	plastid	85.06	84.55
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	84.76	84.24
TraesCS6A01G392700.1	Wheat	golgi	92.38	79.95
CDY18564	Canola	extracellular, plasma membrane	32.32	29.2
Zm00001d031970_P001	Maize	cytosol	19.82	29.15
Zm00001d043967_P001	Maize	extracellular	10.37	28.33
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	25.61	24.56
Zm00001d031666_P002	Maize	extracellular	25.3	23.99
Zm00001d003086_P001	Maize	plastid	26.22	22.99
Zm00001d011363_P002	Maize	cytosol	23.17	21.35
Zm00001d033338_P002	Maize	plastid	30.18	21.02
Zm00001d006365_P001	Maize	mitochondrion	25.61	20.64
Zm00001d007858_P001	Maize	plastid	25.0	19.95
Zm00001d036024_P001	Maize	extracellular, mitochondrion	24.09	19.95
Zm00001d032921_P001	Maize	cytosol	25.91	13.51
Zm00001d043151_P001	Maize	plastid	7.62	12.25
Bra017398.1-P	Field mustard	extracellular	4.88	12.12

Protein Annotations

EMBL:BT085047	EMBL:BT088358	EnsemblPlants:Zm00001d018485_P002	EnsemblPlants:Zm00001d018485_T002	EnsemblPlantsGene:Zm00001d018485	EntrezGene:100282429
Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB-rel	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43150
PFAM:PF00248	PRINTS:PR01577	ProteinID:AQK76209.1	ProteinID:AQK76210.1	ProteinID:AQK76211.1	SUPFAM:SSF51430
UniParc:UPI0001A4BF8F	UniProt:C4J2K0	MapMan:35.1	:	:	:

Description

Probable voltage-gated potassium channel subunit beta

Coordinates

chr5:+:221680806..221687059

Molecular Weight (calculated)

36490.3 Da

IEP (calculated)

7.429

GRAVY (calculated)

-0.250

Length

328 amino acids

Sequence
(BLAST)

001: MQYKNLGRSG LRVSQLSYGA WVTFGNQLDV KEAKALLQAC RDAGVNFFDN AEVYANGRAE EIMGQAIRDL GWRRSDVVIS TKLFWGGQGP NDKGLSRKHV
101: VEGLRASLRR LDMDYVDVVY CHRPDASTPV EETVRAINWV IDQGWAFYWG TSEWSAQQIT EAWAVANRLD LVGPIVEQPE YNLFSRHKVE SEFLPLYSTY
201: GIGLTTWSPL ASGVLTGKYT KGNIPADSRF ALDNYKNLAN RSLVDDTLRK VNGLKPIAAE LGVSLAQLSI AWCASNPNVS SVITGATKES QIVENMKALD
301: VIPLLTPEVV DRIEAVVQSK PKRTESYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.