Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- plastid 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G040080.2 | Barley | cytosol | 31.67 | 52.05 |
| GSMUA_Achr5P16000_001 | Banana | cytosol, nucleus, plastid | 61.67 | 49.01 |
| GSMUA_Achr5P16010_001 | Banana | cytosol | 45.0 | 46.15 |
| OQU82703 | Sorghum | plastid | 57.5 | 44.81 |
| HORVU2Hr1G082740.6 | Barley | cytosol, plastid | 65.0 | 43.33 |
| TraesCS5B01G331500.2 | Wheat | cytosol | 44.17 | 38.69 |
| Solyc09g097950.1.1 | Tomato | cytosol | 42.5 | 34.23 |
| TraesCS5A01G331200.1 | Wheat | cytosol | 60.83 | 31.6 |
| Os04t0337800-00 | Rice | mitochondrion | 61.67 | 28.68 |
| Bra027135.1-P | Field mustard | cytosol, mitochondrion, nucleus | 59.17 | 27.84 |
| Bra027139.1-P | Field mustard | cytosol | 53.33 | 25.3 |
| Bra027138.1-P | Field mustard | cytosol | 52.5 | 25.0 |
| Os04t0338000-01 | Rice | plasma membrane | 67.5 | 23.08 |
| HORVU2Hr1G066920.7 | Barley | cytosol | 66.67 | 22.92 |
| EER97210 | Sorghum | cytosol, mitochondrion | 66.67 | 22.92 |
| AT1G60750.1 | Thale cress | cytosol | 60.0 | 21.82 |
| Bra031486.1-P | Field mustard | cytosol | 60.0 | 21.43 |
| CDY70614 | Canola | cytosol | 60.0 | 21.36 |
| CDY34675 | Canola | cytosol | 37.5 | 21.33 |
| Os04t0337500-01 | Rice | plasma membrane | 61.67 | 21.14 |
| Bra027140.1-P | Field mustard | cytosol, nucleus, peroxisome | 58.33 | 20.96 |
| AT1G60710.1 | Thale cress | cytosol | 59.17 | 20.58 |
| AT1G60680.1 | Thale cress | cytosol, mitochondrion | 58.33 | 20.23 |
| Bra031485.1-P | Field mustard | cytosol, mitochondrion | 59.17 | 19.72 |
| AT1G60690.1 | Thale cress | cytosol | 56.67 | 19.71 |
| Zm00001d006365_P001 | Maize | mitochondrion | 66.67 | 19.66 |
| Bra027134.1-P | Field mustard | cytosol | 55.83 | 19.65 |
| Bra027142.1-P | Field mustard | cytosol | 59.17 | 19.35 |
| AT1G60730.3 | Thale cress | cytosol | 58.33 | 19.18 |
| GSMUA_Achr5P16020_001 | Banana | cytosol | 62.5 | 18.99 |
| AT1G10810.1 | Thale cress | mitochondrion, peroxisome, plastid | 54.17 | 18.9 |
| HORVU3Hr1G054640.2 | Barley | cytosol | 46.67 | 16.42 |
| HORVU7Hr1G039930.1 | Barley | cytosol | 45.83 | 16.13 |
| PGSC0003DMT400042838 | Potato | cytosol | 46.67 | 12.47 |
| HORVU4Hr1G013600.1 | Barley | mitochondrion | 20.0 | 11.94 |
| CDY34139 | Canola | cytosol | 19.17 | 9.09 |
| HORVU2Hr1G060710.1 | Barley | mitochondrion, plastid | 27.5 | 8.89 |
| HORVU2Hr1G060730.2 | Barley | cytosol, mitochondrion | 27.5 | 8.73 |
| HORVU3Hr1G014470.2 | Barley | cytosol | 25.0 | 8.36 |
| HORVU1Hr1G047820.1 | Barley | cytosol, peroxisome, plastid | 25.83 | 7.33 |
| HORVU3Hr1G014430.1 | Barley | cytosol | 20.0 | 7.14 |
| HORVU6Hr1G091250.1 | Barley | mitochondrion | 19.17 | 7.01 |
| HORVU6Hr1G026790.4 | Barley | plastid | 15.83 | 6.74 |
| HORVU4Hr1G013530.5 | Barley | mitochondrion | 25.83 | 6.39 |
| HORVU2Hr1G082700.1 | Barley | extracellular | 10.83 | 4.89 |
| VIT_05s0062g00990.t01 | Wine grape | cytosol, extracellular | 1.67 | 1.32 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G026770.1 | EnsemblPlantsGene:HORVU6Hr1G026770 | Gene3D:3.20.20.100 | InterPro:IPR036812 | InterPro:NADP_OxRdtase_dom | InterPro:NADP_OxRdtase_dom_sf |
| PANTHER:PTHR43625 | PANTHER:PTHR43625:SF18 | PFAM:PF00248 | SEG:seg | SUPFAM:SSF51430 | UniParc:UPI000B4697D2 |
| UniProt:A0A287TNG2 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:103425850..103426382
Molecular Weight (calculated)
12439.1 Da
IEP (calculated)
5.020
GRAVY (calculated)
0.186
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPMVPRMK LGSQGLEVSA QGLGCMGMSA NYGPAKPDED MVALLSHAVA AGVTLLDTSD AYDPFTNELL LGKVLQGGLL ATGGAGVQVA TKFGVKFIEA
101: PPGWEFYGST AYVRRACEGI
101: PPGWEFYGST AYVRRACEGI
001: MAEACGVRRI KLGSQGLEVS AQGLGCMGLS AFYGTPKPET EAIALIHHAI HSGVTFLDTS DIYGPETNEL LLSKALKDGV REKVELATKY GIRYAEGKVE
101: FKGDPAYVRA ACEASLMRVD VACIDLYYQH RIDTRVPIEI TVSTLLVNLP SWFCNFQMKW KLYSSSHFSV SFTHVARDML GLI
101: FKGDPAYVRA ACEASLMRVD VACIDLYYQH RIDTRVPIEI TVSTLLVNLP SWFCNFQMKW KLYSSSHFSV SFTHVARDML GLI
Arabidopsis Description
NAD(P)-linked oxidoreductase superfamily protein [Source:TAIR;Acc:AT1G60730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.