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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • plastid 5
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
 plasma membrane: 19502382
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU76240 Sorghum mitochondrion 81.41 81.41
TraesCS2A01G326100.1 Wheat mitochondrion 79.44 81.27
TraesCS2D01G336700.1 Wheat cytosol 78.87 80.69
EER97869 Sorghum cytosol 79.72 80.17
TraesCS2B01G356100.1 Wheat cytosol 67.89 79.8
TraesCS2B01G355900.1 Wheat cytosol, mitochondrion 77.75 79.54
TraesCS2D01G336900.1 Wheat cytosol, mitochondrion 76.62 79.07
Os04t0338000-01 Rice plasma membrane 78.03 78.92
TraesCS2A01G325800.2 Wheat cytosol, mitochondrion 77.75 77.75
Os04t0337500-01 Rice plasma membrane 76.34 77.43
KRH45230 Soybean nucleus 74.08 76.9
TraesCS2D01G336800.1 Wheat cytosol, mitochondrion 76.62 75.14
KRH55515 Soybean cytosol 71.83 74.34
AT1G60750.1 Thale cress cytosol 67.89 73.03
Bra027140.1-P Field mustard cytosol, nucleus, peroxisome 68.17 72.46
AT1G60710.1 Thale cress cytosol 70.14 72.17
Os04t0337800-00 Rice mitochondrion 51.83 71.32
KRG94634 Soybean cytosol 13.24 71.21
KRH55516 Soybean cytosol 68.73 70.93
AT1G60690.1 Thale cress cytosol 68.73 70.72
AT1G60680.1 Thale cress cytosol, mitochondrion 68.73 70.52
CDY70614 Canola cytosol 66.76 70.33
Bra031486.1-P Field mustard cytosol 66.2 69.94
Bra031485.1-P Field mustard cytosol, mitochondrion 69.86 68.89
VIT_05s0062g00990.t01 Wine grape cytosol, extracellular 29.3 68.87
AT1G10810.1 Thale cress mitochondrion, peroxisome, plastid 66.2 68.31
AT1G60730.3 Thale cress cytosol 70.14 68.22
Bra027134.1-P Field mustard cytosol 65.35 68.04
Os04t0338100-01 Rice cytosol, nucleus 20.85 66.07
Bra027142.1-P Field mustard cytosol 67.32 65.12
GSMUA_Achr5P16020_001 Banana cytosol 72.11 64.81
CDY34139 Canola cytosol 45.92 64.43
CDY34675 Canola cytosol 38.03 63.98
Bra027135.1-P Field mustard cytosol, mitochondrion, nucleus 45.92 63.92
Bra027138.1-P Field mustard cytosol 44.51 62.7
Bra027139.1-P Field mustard cytosol 43.94 61.66
GSMUA_Achr5P16010_001 Banana cytosol 20.28 61.54
GSMUA_Achr5P16000_001 Banana cytosol, nucleus, plastid 25.63 60.26
Os10t0419100-01 Rice cytosol, plasma membrane 54.37 56.27
Os01t0618100-01 Rice plasma membrane 52.39 54.07
Solyc09g097950.1.1 Tomato cytosol 16.9 40.27
PGSC0003DMT400042838 Potato cytosol 50.42 39.87
Os07t0142900-01 Rice plastid 28.17 26.6
Os07t0143000-01 Rice mitochondrion, plastid 28.17 26.53
Os02t0817500-01 Rice mitochondrion 24.51 26.52
Os10t0517400-01 Rice plasma membrane 25.35 24.0
Os11t0645200-01 Rice extracellular 21.41 22.42
Os03t0611200-01 Rice plastid 25.07 21.98
Protein Annotations
Gene3D:3.20.20.100EntrezGene:4335515MapMan:50.1.1EMBL:AK103553ProteinID:BAF14411.1ProteinID:BAS88655.1
ProteinID:CAE03315.2ProteinID:EAZ30275.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114InterPro:IPR036812InterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sfEnsemblPlantsGene:Os04g0339400
EnsemblPlants:Os04t0339400-01PFAM:PF00248PANTHER:PTHR43625PANTHER:PTHR43625:SF18UniProt:Q7XQ45SUPFAM:SSF51430
UniParc:UPI00001B1610RefSeq:XP_015634128.1SEG:seg:::
Description
aldo-keto reductaseAldo/keto reductase family protein. (Os04t0339400-01)
Coordinates
chr4:+:16001505..16005150
Molecular Weight (calculated)
38275.5 Da
IEP (calculated)
5.847
GRAVY (calculated)
-0.121
Length
355 amino acids
Sequence
(BLAST)
001: MAAAAATAPA AAVVRRMKLG SQGMEVSAQG LGCMGMSAVY GERKPEADMV ALVRHAVAAG VTFLDTSDVY GPHTNEVLVG KAVAAAAATE EEVQVQVATK
101: FGITPAWEVR GDPAYVRAAC EGSLRRLGVG CIDLYYQHRI DSTVPVEITM GELKKLVEEG KIKYIGLSEA SASTIRRAHV VHPITAVQIE WSLWSRDVEE
201: DIVPTCRELG IGIVAYSPLG RGFFSSGAKL VDELPDDDFR KSLPRFQPEN LEKNAAIFEK VNAMAARKGC TSSQLALAWV HHQGSDVCPI PGTTKIHNFD
301: QNVGALSVKL TPDEMSELES YASADVVQGD RYHGTFLNTW KNSETPPLSS WRSGN
Best Arabidopsis Sequence Match ( AT1G60710.1 )
(BLAST)
001: MAEACGVRRM KLGSQGLEVS AQGLGCMGLS AFYGAPKPEN EAIALIHHAI HSGVTLLDTS DIYGPETNEV LLGKALKDGV REKVELATKF GISYAEGKRE
101: VRGDPEYVRA ACEASLKRLD IACIDLYYQH RVDTRVPIEI TMGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITAVQ IEWSLWTRDV EEEIIPTCRE
201: LGIGIVAYSP LGRGFFASGP KLVENLEKDD FRKALPRFQE ENLDHNKIVY EKVCAISEKK GCTPGQLALA WVHHQGDDVC PIPGTTKIEN LKQNIGALSV
301: KLTPEEMTEL EAIAQPGFVK GDRYSNMIPT FKNAETPPLS AWKAA
Arabidopsis Description
ATB2Probable aldo-keto reductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZN2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.