Factsheet for VIT_14s0030g01970.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	28.82	90.09
VIT_14s0030g02020.t01	Wine grape	cytosol	88.18	88.18
VIT_14s0030g01980.t01	Wine grape	cytosol	86.17	87.43
VIT_14s0030g02050.t01	Wine grape	cytosol	80.98	81.92
VIT_14s0030g01990.t01	Wine grape	cytosol	73.49	72.65
VIT_14s0030g02060.t01	Wine grape	peroxisome	73.2	72.36
EER91589	Sorghum	cytosol	69.16	70.38
KRH68728	Soybean	cytosol, nucleus	68.3	69.91
VIT_14s0030g01960.t01	Wine grape	cytosol	68.01	69.62
Os10t0419100-01	Rice	cytosol, plasma membrane	67.72	68.51
HORVU7Hr1G039930.1	Barley	cytosol	67.15	68.33
TraesCS7D01G197100.1	Wheat	cytosol	66.86	68.04
Solyc01g097380.1.1	Tomato	plastid	65.13	67.87
TraesCS7B01G101300.1	Wheat	cytosol	65.71	67.86
TraesCS7A01G195600.1	Wheat	cytosol	66.57	67.74
Solyc01g097390.2.1	Tomato	plastid	67.15	67.73
KRH34080	Soybean	cytosol	64.84	66.37
HORVU7Hr1G040080.2	Barley	cytosol	13.83	65.75
VIT_05s0020g04130.t01	Wine grape	cytosol	64.55	64.93
TraesCS3B01G252400.1	Wheat	cytosol	63.4	64.52
TraesCS3D01G230600.1	Wheat	cytosol, golgi, unclear	63.4	64.52
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	63.4	64.33
OQU87178	Sorghum	cytosol	63.69	64.24
HORVU3Hr1G054640.2	Barley	cytosol	63.11	64.22
TraesCS7B01G089600.1	Wheat	cytosol	63.69	64.06
TraesCS3A01G222900.1	Wheat	cytosol, golgi, nucleus	62.82	63.93
EES03282	Sorghum	cytosol	64.27	63.9
Os01t0618100-01	Rice	plasma membrane	63.11	63.66
TraesCS7A01G185000.1	Wheat	cytosol	63.11	63.29
TraesCS7A01G184900.1	Wheat	cytosol	61.96	63.24
TraesCS7D01G186400.1	Wheat	cytosol	63.69	63.14
TraesCS7B01G090000.1	Wheat	cytosol	62.54	62.54
TraesCS7B01G089800.1	Wheat	cytosol	56.2	60.94
KXG33406	Sorghum	mitochondrion	54.18	59.49
Os04t0338100-01	Rice	cytosol, nucleus	19.02	58.93
KXG32909	Sorghum	plastid	63.4	57.29
VIT_05s0062g01000.t01	Wine grape	cytosol	52.16	57.28
VIT_05s0062g00980.t01	Wine grape	cytosol	51.87	56.6
VIT_05s0062g01010.t01	Wine grape	cytosol	49.57	54.43
KRH07938	Soybean	cytosol, extracellular, plastid	16.14	52.83
VIT_05s0062g00950.t01	Wine grape	cytosol	29.39	51.0
Zm00001d011363_P002	Maize	cytosol	52.16	50.84
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	19.6	45.03
Zm00001d032921_P001	Maize	cytosol	68.3	37.68
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	14.7	27.87
VIT_12s0028g01100.t01	Wine grape	plastid	27.95	26.43
VIT_05s0051g00650.t01	Wine grape	mitochondrion	24.5	25.91
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	23.63	25.31
VIT_05s0049g01130.t01	Wine grape	plastid	26.22	21.77

Protein Annotations

EntrezGene:100255544	wikigene:100255544	Gene3D:3.20.20.100	MapMan:50.1.1	ProteinID:CCB58084	ProteinID:CCB58084.1
UniProt:F6HTS3	EMBL:FN596249	InterPro:IPR036812	EntrezGene:LOC100255544	wikigene:LOC100255544	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PANTHER:PTHR43625	PANTHER:PTHR43625:SF2	SUPFAM:SSF51430	UniParc:UPI0002109951
ArrayExpress:VIT_14s0030g01970	EnsemblPlantsGene:VIT_14s0030g01970	EnsemblPlants:VIT_14s0030g01970.t01	RefSeq:XP_002273300	RefSeq:XP_002273300.2	RefSeq:XP_010659886.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:6973561..6979774

Molecular Weight (calculated)

38302.3 Da

IEP (calculated)

5.828

GRAVY (calculated)

-0.150

Length

347 amino acids

Sequence
(BLAST)

001: MAELQMVGVQ LPRVKLGNQG LEVSKLGLGC RGLSGGYNNP VPDDVGIAII KHAFSKGITF FDTADAYGAQ ANEVLIGKAL KELPREKIQL ATKFGHAGFD
101: PATGLIVNGT PKYVRSCCEA SLKCLDVEYI DLYYQHRIDK SVPIEETMGE LKKLVEEEKI KYIGLSEASP DTIRRAYAVH PVTALQMEWS LWTRDIEEEI
201: VPLCRELGIG IVPYSPLGRG FFGGKAVDEN VPANSFLRSI PRFQGENFEK NKIIYTKMEM LAEKYRCTPA QLALAWVLCR GDNVAPIPGT TKIKNLDDNI
301: GSLRLNLTKE DLEEISDAVP LTEVAGARAP DVLTSTLWQF ANTRARV

Best Arabidopsis Sequence Match ( AT1G60680.1 )
(BLAST)

001: MAEACRVRRM KLGSQGLEVS AQGLGCMALS ARYGAPKPET DAIALLHHAI NSGVTFFDTS DMYGPETNEL LLGKALKDGV KEKVELATKF GFFIVEGEIS
101: EVRGDPEYVR AACEASLKRL DIACIDLYYQ HRIDTRVPIE ITMRELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QIEWSLWSRD AEEDIIPICR
201: ELGIGIVAYS PLGRGFLAAG PKLAENLEND DFRKTLPRFQ QENVDHNKIL FEKVSAMAEK KGCTPAQLAL AWVHHQGDDV CPIPGTTKIE NLNQNIRALS
301: VKLTPEEISE LDSLAKPESV KGERYMASMS TFKNSNTPPL SSWKAT

Arabidopsis Description

AGD2Probable aldo-keto reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84M96]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.