CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
nucleus 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	77.29	86.11
Bra003045.1-P	Field mustard	plastid	77.84	77.84
CDY14368	Canola	plastid	77.84	77.84
AT5G53580.1	Thale cress	plastid	77.84	76.99
CDY20245	Canola	plastid	77.01	76.8
PGSC0003DMT400047623	Potato	plastid	78.67	76.76
Solyc03g082560.2.1	Tomato	nucleus	78.12	76.22
GSMUA_Achr3P18270_001	Banana	plastid	74.24	70.9
Os10t0517400-01	Rice	plasma membrane	73.13	70.4
EER93936	Sorghum	plastid	72.02	70.08
TraesCS1D01G184400.1	Wheat	plastid	72.3	69.6
TraesCS1B01G199700.1	Wheat	plastid	72.3	69.6
TraesCS1A01G180800.1	Wheat	plastid	71.47	68.8
HORVU1Hr1G047820.1	Barley	cytosol, peroxisome, plastid	71.75	61.23
KRG99028	Soybean	plastid	41.27	40.49
KRH45977	Soybean	plastid	41.27	40.49
KRG94635	Soybean	cytosol	19.39	27.45
KRG96965	Soybean	cytosol	18.28	27.39
KRH34080	Soybean	cytosol	25.21	26.84
KRH68728	Soybean	cytosol, nucleus	24.93	26.55
KRH35444	Soybean	cytosol	25.21	26.45
KRH68755	Soybean	cytosol	18.28	26.19
KRH55516	Soybean	cytosol	24.93	26.16
KRH35448	Soybean	nucleus	25.21	26.15
KRH45230	Soybean	nucleus	24.65	26.02
KRH55515	Soybean	cytosol	24.38	25.66
KRH68757	Soybean	cytosol, golgi, nucleus	24.38	25.43
KRH68760	Soybean	cytosol	19.94	24.0
KRH07938	Soybean	cytosol, extracellular, plastid	6.93	23.58
KRH33472	Soybean	nucleus	21.05	23.17
KRG90245	Soybean	nucleus	21.05	23.17
KRH42967	Soybean	extracellular	22.16	22.35
KRH59094	Soybean	extracellular, peroxisome, plastid	21.88	22.07
KRH68759	Soybean	nucleus	24.93	21.84
KRH69116	Soybean	plastid	21.05	18.05
KRG97174	Soybean	cytosol	6.09	17.6
KRG94634	Soybean	cytosol	3.05	16.67

Protein Annotations

EntrezGene:100791681	Gene3D:3.20.20.100	MapMan:35.1	EMBL:ACUP02003475	InterPro:Aldo/ket_reductase_CS	EnsemblPlantsGene:GLYMA_06G133700
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
UniProt:I1KAY6	InterPro:IPR036812	EnsemblPlants:KRH53587	ProteinID:KRH53587	ProteinID:KRH53587.1	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF5	SUPFAM:SSF51430
UniParc:UPI0002339D10	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:10995438..10999422

Molecular Weight (calculated)

40196.9 Da

IEP (calculated)

9.469

GRAVY (calculated)

-0.140

Length

361 amino acids

Sequence
(BLAST)

001: MALSVCSMNI NPIALAAPSF SFKSLKFPSF WPTQKVKMGP LSVSPMGFGT WAWGNQLLWG YQESMDNELQ QIFNLAMDNG INLFDTADSY GTGRLNGQSE
101: KLLGRFIREF QEQKGSQREI VIATKFAAYP WRLTPGQFVS ACRASLDRMQ IEQIGIGQLH WSTANYAPLQ EFALWDGLVA MYEKDLVKAV GVSNYGPKQL
201: LKIHDYLKDR GVPLCSAQVQ FSLLSTGKDQ LEIKSICDSL GIRMIAYSPL GLGMLTGKYS SSKLPSGPRA LLFKQILPGL DPLLSSLREI ANKRRKTMSQ
301: VAINWCICKG TVPIPGVKTI KQAEENLGAL GWRLSSDELL QLEDAANESP RRMIQNIFQT R

Best Arabidopsis Sequence Match ( AT5G53580.1 )
(BLAST)

001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR

Arabidopsis Description

PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.