Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P11830_001 | Banana | cytosol | 95.89 | 83.33 |
| HORVU1Hr1G045180.2 | Barley | cytosol | 35.62 | 81.25 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 90.41 | 78.57 |
| Zm00001d014883_P001 | Maize | cytosol, extracellular, mitochondrion | 90.41 | 78.57 |
| HORVU1Hr1G010560.1 | Barley | cytosol | 34.25 | 78.12 |
| TraesCS7A01G558300.1 | Wheat | cytosol, extracellular | 89.73 | 77.98 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 89.73 | 77.98 |
| TraesCS7D01G551700.1 | Wheat | cytosol | 89.73 | 77.98 |
| KRH00921 | Soybean | cytosol | 88.36 | 77.71 |
| KRH40302 | Soybean | cytosol, nucleus | 87.67 | 77.11 |
| Os02t0761900-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 87.67 | 76.19 |
| PGSC0003DMT400075872 | Potato | cytosol | 85.62 | 75.3 |
| HORVU5Hr1G024120.1 | Barley | cytosol | 47.26 | 75.0 |
| HORVU1Hr1G058220.1 | Barley | cytosol | 25.34 | 71.15 |
| CDY69168 | Canola | cytosol | 80.82 | 71.08 |
| Bra001062.1-P | Field mustard | cytosol | 80.82 | 71.08 |
| Bra021412.1-P | Field mustard | cytosol | 80.82 | 71.08 |
| CDX74237 | Canola | cytosol | 80.82 | 71.08 |
| CDY53745 | Canola | cytosol | 80.82 | 71.08 |
| CDX70694 | Canola | cytosol | 80.14 | 70.48 |
| CDX78691 | Canola | cytosol | 80.14 | 70.48 |
| AT3G02770.1 | Thale cress | cytosol | 80.14 | 70.48 |
| AT5G16450.1 | Thale cress | cytosol | 80.14 | 70.48 |
| Bra006355.1-P | Field mustard | cytosol | 79.45 | 69.88 |
| CDX92011 | Canola | cytosol | 79.45 | 69.88 |
| HORVU1Hr1G040320.1 | Barley | cytosol | 41.78 | 69.32 |
| EES02468 | Sorghum | cytosol | 79.45 | 69.05 |
| Zm00001d039841_P001 | Maize | extracellular | 78.08 | 67.86 |
| Os02t0762100-01 | Rice | cytosol, plasma membrane | 76.71 | 66.67 |
| HORVU3Hr1G024340.2 | Barley | cytosol | 45.89 | 65.05 |
| TraesCS7A01G558200.1 | Wheat | cytosol, plastid | 73.97 | 64.29 |
| VIT_04s0023g00590.t01 | Wine grape | cytosol | 85.62 | 63.13 |
| TraesCS7B01G483100.1 | Wheat | cytosol | 72.6 | 63.1 |
| TraesCS7D01G551600.1 | Wheat | cytosol, unclear | 72.6 | 63.1 |
| TraesCS7D01G552200.1 | Wheat | cytosol | 71.23 | 61.9 |
| HORVU3Hr1G110300.1 | Barley | cytosol | 47.26 | 61.06 |
| GSMUA_Achr1P09370_001 | Banana | cytosol | 69.18 | 60.84 |
| HORVU3Hr1G042110.1 | Barley | mitochondrion | 35.62 | 50.98 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 85.62 | 49.8 |
| HORVU7Hr1G120490.20 | Barley | plastid | 89.73 | 48.34 |
| KXG31862 | Sorghum | cytosol | 58.9 | 48.31 |
| HORVU5Hr1G074130.1 | Barley | cytosol | 47.95 | 46.98 |
| CDX96297 | Canola | cytosol | 17.12 | 30.49 |
Protein Annotations
| Gene3D:3.50.30.40 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008428 | GO:GO:0008948 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0030234 | GO:GO:0043086 | GO:GO:0046872 | GO:GO:0047443 | GO:GO:0051252 | EnsemblPlantsGene:GSMUA_Achr4G05260_001 |
| EnsemblPlants:GSMUA_Achr4P05260_001 | EnsemblPlants:GSMUA_Achr4T05260_001 | UniProt:M0SL93 | PFAM:PF03737 | PANTHER:PTHR33254 | PANTHER:PTHR33254:SF13 |
| InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | SUPFAM:SSF89562 | TIGRFAMs:TIGR01935 | UniParc:UPI000295C26E |
Description
Regulator of ribonuclease-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G05260_001]
Coordinates
chr4:-:4061824..4062622
Molecular Weight (calculated)
15680.1 Da
IEP (calculated)
5.730
GRAVY (calculated)
0.136
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALQLATAE VCDANPHLIL SGDLRALQPI FQIYGRRQVF SGPIVTLKVF EDNVLVREFL EEKGNGRVLV VDGGASMRCA ILGGNPVQQA QNNGWAGIIV
101: NGCIRDVDEI NGCDIGVRAL APHPMKANKK GIDTDGILVS RMELTV
101: NGCIRDVDEI NGCDIGVRAL APHPMKANKK GIDTDGILVS RMELTV
001: MAFVTTAEVC DANQEMIRSG QLRALQPVFQ IYGRRQIFSG PVVTVKVFED NGLIRHFLEE KGNGRVLVVD GGGSLRCAIL GGNPVVQAQN NGWAGIIVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVSLNIA GTRICDGEWL YADTDGILVS QIELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVSLNIA GTRICDGEWL YADTDGILVS QIELSV
Arabidopsis Description
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8R9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.