Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006355.1-P | Field mustard | cytosol | 99.4 | 99.4 |
| CDX70694 | Canola | cytosol | 98.8 | 98.8 |
| CDY53745 | Canola | cytosol | 95.18 | 95.18 |
| CDY69168 | Canola | cytosol | 95.18 | 95.18 |
| AT5G16450.1 | Thale cress | cytosol | 95.18 | 95.18 |
| CDX74237 | Canola | cytosol | 93.98 | 93.98 |
| CDX92011 | Canola | cytosol | 93.37 | 93.37 |
| KRH00921 | Soybean | cytosol | 85.54 | 85.54 |
| KRH40302 | Soybean | cytosol, nucleus | 84.94 | 84.94 |
| PGSC0003DMT400075872 | Potato | cytosol | 83.73 | 83.73 |
| TraesCS7A01G558300.1 | Wheat | cytosol, extracellular | 81.93 | 80.95 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 81.33 | 80.36 |
| GSMUA_Achr4P05260_001 | Banana | cytosol | 70.48 | 80.14 |
| TraesCS7D01G551700.1 | Wheat | cytosol | 80.72 | 79.76 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 80.72 | 79.76 |
| GSMUA_Achr4P11830_001 | Banana | cytosol | 80.72 | 79.76 |
| Zm00001d014883_P001 | Maize | cytosol, extracellular, mitochondrion | 80.12 | 79.17 |
| Os02t0761900-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 77.71 | 76.79 |
| EES02468 | Sorghum | cytosol | 72.29 | 71.43 |
| Os02t0762100-01 | Rice | cytosol, plasma membrane | 72.29 | 71.43 |
| TraesCS7D01G551600.1 | Wheat | cytosol, unclear | 72.29 | 71.43 |
| TraesCS7A01G558200.1 | Wheat | cytosol, plastid | 71.69 | 70.83 |
| Zm00001d039841_P001 | Maize | extracellular | 71.69 | 70.83 |
| VIT_04s0023g00590.t01 | Wine grape | cytosol | 83.73 | 70.2 |
| TraesCS7B01G483100.1 | Wheat | cytosol | 69.88 | 69.05 |
| CDY20739 | Canola | cytosol | 68.07 | 68.07 |
| CDY36787 | Canola | cytosol | 68.07 | 68.07 |
| CDY06513 | Canola | cytosol | 67.47 | 67.47 |
| CDY11948 | Canola | cytosol | 67.47 | 67.47 |
| HORVU1Hr1G058220.1 | Barley | cytosol | 21.08 | 67.31 |
| TraesCS7D01G552200.1 | Wheat | cytosol | 68.07 | 67.26 |
| HORVU1Hr1G045180.2 | Barley | cytosol | 24.7 | 64.06 |
| HORVU5Hr1G024120.1 | Barley | cytosol | 34.94 | 63.04 |
| CDX96297 | Canola | cytosol | 30.12 | 60.98 |
| HORVU1Hr1G010560.1 | Barley | cytosol | 22.89 | 59.38 |
| HORVU1Hr1G040320.1 | Barley | cytosol | 31.33 | 59.09 |
| CDY32800 | Canola | cytosol | 26.51 | 58.67 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 83.73 | 55.38 |
| HORVU3Hr1G024340.2 | Barley | cytosol | 34.34 | 55.34 |
| CDY62102 | Canola | cytosol | 29.52 | 55.06 |
| HORVU3Hr1G110300.1 | Barley | cytosol | 34.34 | 50.44 |
| KXG31862 | Sorghum | cytosol | 53.61 | 50.0 |
| HORVU7Hr1G120490.20 | Barley | plastid | 80.12 | 49.08 |
| HORVU3Hr1G042110.1 | Barley | mitochondrion | 27.71 | 45.1 |
| HORVU5Hr1G074130.1 | Barley | cytosol | 37.35 | 41.61 |
Protein Annotations
| Gene3D:3.50.30.40 | MapMan:35.1 | GO:A0A078CNC0 | EnsemblPlants:CDX78691 | ProteinID:CDX78691 | ProteinID:CDX78691.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008428 |
| GO:GO:0008948 | GO:GO:0009987 | GO:GO:0030234 | GO:GO:0047443 | GO:GO:0051252 | EnsemblPlantsGene:GSBRNA2T00130118001 |
| PFAM:PF03737 | PANTHER:PTHR33254 | PANTHER:PTHR33254:SF13 | InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf |
| SUPFAM:SSF89562 | TIGRFAMs:TIGR01935 | UniParc:UPI0001890A7A | : | : | : |
Description
BnaA03g06030D
Coordinates
chrLK031815:+:1839267..1840289
Molecular Weight (calculated)
17754.3 Da
IEP (calculated)
4.937
GRAVY (calculated)
0.022
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVTTAEVC DANQDLIRSG ELKALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFLEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIIVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWV YADTDGVLVS QTELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWV YADTDGVLVS QTELSV
001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
Arabidopsis Description
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.