CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039841_P001	Maize	extracellular	94.64	94.64
GSMUA_Achr3P14020_001	Banana	cytosol	82.14	82.14
Os02t0762100-01	Rice	cytosol, plasma membrane	80.95	80.95
GSMUA_Achr4P11830_001	Banana	cytosol	80.36	80.36
GSMUA_Achr4P05260_001	Banana	cytosol	69.05	79.45
TraesCS7B01G483100.1	Wheat	cytosol	76.79	76.79
PGSC0003DMT400075872	Potato	cytosol	75.6	76.51
TraesCS7D01G551600.1	Wheat	cytosol, unclear	75.6	75.6
KRH40302	Soybean	cytosol, nucleus	74.4	75.3
TraesCS7A01G558200.1	Wheat	cytosol, plastid	75.0	75.0
AT5G16450.1	Thale cress	cytosol	73.21	74.1
KRH00921	Soybean	cytosol	73.21	74.1
TraesCS7D01G552200.1	Wheat	cytosol	73.81	73.81
Bra021412.1-P	Field mustard	cytosol	72.02	72.89
CDY69168	Canola	cytosol	72.02	72.89
CDY53745	Canola	cytosol	72.02	72.89
Bra001062.1-P	Field mustard	cytosol	72.02	72.89
CDX74237	Canola	cytosol	72.02	72.89
CDX92011	Canola	cytosol	71.43	72.29
CDX78691	Canola	cytosol	71.43	72.29
CDX70694	Canola	cytosol	71.43	72.29
AT3G02770.1	Thale cress	cytosol	70.83	71.69
Bra006355.1-P	Field mustard	cytosol	70.83	71.69
KXG31862	Sorghum	cytosol	69.05	65.17
VIT_04s0023g00590.t01	Wine grape	cytosol	75.6	64.14
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	75.6	50.6
CDX96297	Canola	cytosol	22.62	46.34

Protein Annotations

Gene3D:3.50.30.40	MapMan:35.1	EntrezGene:8060782	UniProt:C5XPX9	EnsemblPlants:EES02468	ProteinID:EES02468
ProteinID:EES02468.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008428	GO:GO:0008948	GO:GO:0009987	GO:GO:0016829	GO:GO:0030234
GO:GO:0043086	GO:GO:0046872	GO:GO:0047443	GO:GO:0051252	PFAM:PF03737	PANTHER:PTHR33254
PANTHER:PTHR33254:SF15	InterPro:RraA	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	EnsemblPlantsGene:SORBI_3003G069500	SUPFAM:SSF89562
TIGRFAMs:TIGR01935	UniParc:UPI0001A851B1	RefSeq:XP_002457348.1	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:5938350..5941061

Molecular Weight (calculated)

17878.6 Da

IEP (calculated)

5.225

GRAVY (calculated)

0.175

Length

168 amino acids

Sequence
(BLAST)

001: MAALPLATAE ACDANAALIM NGDLRALQPI FQIYGRRQIF AGPVVTLKIF EDNVLLREFL EEKGHGRVLV VDAGGSMRCA VLGGNLAQLA QNNGWAGVVV
101: NGCIRDVDEI NGCDVGVRAL NSLPIKSNKK GVGEKHAPVT FAGTRICDGE WLYADSDGIL ISRSELTV

Best Arabidopsis Sequence Match ( AT5G16450.2 )
(BLAST)

001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.