Factsheet for Os02t0762100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0761900-01	Rice	cytosol, extracellular, plasma membrane, plastid	81.55	81.55
Zm00001d039841_P001	Maize	extracellular	80.95	80.95
EES02468	Sorghum	cytosol	80.95	80.95
TraesCS7A01G558200.1	Wheat	cytosol, plastid	79.76	79.76
GSMUA_Achr3P14020_001	Banana	cytosol	79.17	79.17
GSMUA_Achr4P11830_001	Banana	cytosol	78.57	78.57
TraesCS7D01G551600.1	Wheat	cytosol, unclear	77.38	77.38
PGSC0003DMT400075872	Potato	cytosol	76.19	77.11
TraesCS7B01G483100.1	Wheat	cytosol	76.79	76.79
GSMUA_Achr4P05260_001	Banana	cytosol	66.67	76.71
KRH40302	Soybean	cytosol, nucleus	74.4	75.3
KRH00921	Soybean	cytosol	73.81	74.7
TraesCS7D01G552200.1	Wheat	cytosol	74.4	74.4
AT5G16450.1	Thale cress	cytosol	72.02	72.89
CDX78691	Canola	cytosol	71.43	72.29
CDX70694	Canola	cytosol	71.43	72.29
CDX74237	Canola	cytosol	70.83	71.69
Bra001062.1-P	Field mustard	cytosol	70.83	71.69
Bra006355.1-P	Field mustard	cytosol	70.83	71.69
Bra021412.1-P	Field mustard	cytosol	70.83	71.69
CDY53745	Canola	cytosol	70.83	71.69
CDY69168	Canola	cytosol	70.83	71.69
AT3G02770.1	Thale cress	cytosol	70.24	71.08
CDX92011	Canola	cytosol	70.24	71.08
VIT_04s0023g00590.t01	Wine grape	cytosol	74.4	63.13
KXG31862	Sorghum	cytosol	60.12	56.74
CDX96297	Canola	cytosol	25.0	51.22
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	76.19	51.0

Protein Annotations

Gene3D:3.50.30.40	MapMan:35.1	EntrezGene:4330813	EMBL:AK059923	EMBL:AK068833	ProteinID:BAD17210.1
ProteinID:BAF10115.1	ProteinID:BAS81041.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008428	GO:GO:0008948	GO:GO:0009987
GO:GO:0016740	GO:GO:0016829	GO:GO:0030234	GO:GO:0032259	GO:GO:0043086	GO:GO:0046872
GO:GO:0047443	GO:GO:0051252	EnsemblPlantsGene:Os02g0762100	EnsemblPlants:Os02t0762100-01	PFAM:PF03737	PANTHER:PTHR33254
PANTHER:PTHR33254:SF15	UniProt:Q6Z6G8	InterPro:RraA	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	SUPFAM:SSF89562
TIGRFAMs:TIGR01935	UniParc:UPI000035AE4B	RefSeq:XP_015623042.1	RefSeq:XP_015623043.1	RefSeq:XP_015623044.1	SEG:seg

Description

Similar to Regulator of ribonuclease-like protein 2. (Os02t0762100-01);Similar to Regulator of ribonuclease-like protein 2. (Os02t0762100-02)

Coordinates

chr2:-:32092748..32094628

Molecular Weight (calculated)

17787.7 Da

IEP (calculated)

6.504

GRAVY (calculated)

0.169

Length

168 amino acids

Sequence
(BLAST)

001: MAALPLATAE VCDANSNPII AGELRALPPI FKIYGRRQVF AGPVATVKVF EDNVLVRELL QEKGHGRVLV VDGGGSVRCA LLGGNLAQLA QINGWVGIVV
101: NGCIRDVDEI NGCDVGVRAL NSHPMKSGKK GAGEKRVPVT IEGTRICDGE WLYADADGIL ISRTELTV

Best Arabidopsis Sequence Match ( AT5G16450.2 )
(BLAST)

001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.