Factsheet for Os02t0761900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20433195
plasma membrane: 27800704
plastid: 27992503

msms PMID: 20433195 doi

A Pandey, U Rajamani, J Verma, P Subba, N Chakraborty, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi-110067, India.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G551700.1	Wheat	cytosol	94.05	94.05
TraesCS7B01G483200.1	Wheat	cytosol	94.05	94.05
Zm00001d014883_P001	Maize	cytosol, extracellular, mitochondrion	92.86	92.86
TraesCS7A01G558300.1	Wheat	cytosol, extracellular	92.86	92.86
GSMUA_Achr3P14020_001	Banana	cytosol	89.88	89.88
GSMUA_Achr4P11830_001	Banana	cytosol	88.69	88.69
GSMUA_Achr4P05260_001	Banana	cytosol	76.19	87.67
KRH40302	Soybean	cytosol, nucleus	85.71	86.75
PGSC0003DMT400075872	Potato	cytosol	84.52	85.54
KRH00921	Soybean	cytosol	84.52	85.54
Os02t0762100-01	Rice	cytosol, plasma membrane	81.55	81.55
CDX70694	Canola	cytosol	77.98	78.92
AT5G16450.1	Thale cress	cytosol	77.38	78.31
CDY53745	Canola	cytosol	77.38	78.31
CDY69168	Canola	cytosol	77.38	78.31
Bra001062.1-P	Field mustard	cytosol	77.38	78.31
Bra021412.1-P	Field mustard	cytosol	77.38	78.31
CDX74237	Canola	cytosol	77.38	78.31
HORVU1Hr1G045180.2	Barley	cytosol	29.76	78.12
AT3G02770.1	Thale cress	cytosol	76.79	77.71
CDX78691	Canola	cytosol	76.79	77.71
CDX92011	Canola	cytosol	76.79	77.71
HORVU5Hr1G024120.1	Barley	cytosol	42.26	77.17
Bra006355.1-P	Field mustard	cytosol	76.19	77.11
HORVU1Hr1G058220.1	Barley	cytosol	23.21	75.0
HORVU1Hr1G010560.1	Barley	cytosol	28.57	75.0
HORVU1Hr1G040320.1	Barley	cytosol	38.1	72.73
VIT_04s0023g00590.t01	Wine grape	cytosol	85.71	72.73
HORVU3Hr1G024340.2	Barley	cytosol	40.48	66.02
HORVU3Hr1G110300.1	Barley	cytosol	41.67	61.95
HORVU7Hr1G120490.20	Barley	plastid	93.45	57.93
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	84.52	56.57
CDX96297	Canola	cytosol	25.6	52.44
HORVU5Hr1G074130.1	Barley	cytosol	44.64	50.34
HORVU3Hr1G042110.1	Barley	mitochondrion	30.36	50.0

Protein Annotations

Gene3D:3.50.30.40	MapMan:35.1	EMBL:AK058782	EMBL:AK059956	ProteinID:BAD17208.1	ProteinID:BAF10114.1
ProteinID:BAS81040.1	ProteinID:EEE57850.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008428	GO:GO:0008948	GO:GO:0009987
GO:GO:0016740	GO:GO:0016829	GO:GO:0030234	GO:GO:0032259	GO:GO:0043086	GO:GO:0046872
GO:GO:0047443	GO:GO:0051252	EnsemblPlantsGene:Os02g0761900	EnsemblPlants:Os02t0761900-01	PFAM:PF03737	PANTHER:PTHR33254
PANTHER:PTHR33254:SF15	UniProt:Q6Z6H0	InterPro:RraA	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	SUPFAM:SSF89562
TIGRFAMs:TIGR01935	UniParc:UPI000035AE49	:	:	:	:

Description

Dimethylmenaquinone methyltransferase family protein. (Os02t0761900-01);Dimethylmenaquinone methyltransferase family protein. (Os02t0761900-02)

Coordinates

chr2:-:32088131..32090119

Molecular Weight (calculated)

18050.9 Da

IEP (calculated)

5.685

GRAVY (calculated)

0.056

Length

168 amino acids

Sequence
(BLAST)

001: MAALPLATAE LCDANAHLIM NGELRALQPV FQVYGRRQVF AGPIVTLKVY EDNVLVREFL EEKGQGRVLV VDGGGSLRCA ILGGNPVQQA QNNGWAGIVV
101: NGCIRDVDEI NGCDIGVRAL NSHPMKANKK GIGEKHVPVT IAGTRICDGE WLYADTDGIL ISRTELTV

Best Arabidopsis Sequence Match ( AT5G16450.2 )
(BLAST)

001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.