Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00921 | Soybean | cytosol | 78.28 | 93.37 |
| KRH40302 | Soybean | cytosol, nucleus | 78.28 | 93.37 |
| PGSC0003DMT400075872 | Potato | cytosol | 77.27 | 92.17 |
| GSMUA_Achr4P11830_001 | Banana | cytosol | 73.74 | 86.9 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 73.23 | 86.31 |
| Os02t0761900-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 72.73 | 85.71 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 72.73 | 85.71 |
| TraesCS7D01G551700.1 | Wheat | cytosol | 72.73 | 85.71 |
| GSMUA_Achr4P05260_001 | Banana | cytosol | 63.13 | 85.62 |
| CDX70694 | Canola | cytosol | 71.21 | 84.94 |
| TraesCS7A01G558300.1 | Wheat | cytosol, extracellular | 71.72 | 84.52 |
| Zm00001d014883_P001 | Maize | cytosol, extracellular, mitochondrion | 71.72 | 84.52 |
| CDY69168 | Canola | cytosol | 70.71 | 84.34 |
| CDY53745 | Canola | cytosol | 70.71 | 84.34 |
| CDX74237 | Canola | cytosol | 70.71 | 84.34 |
| Bra021412.1-P | Field mustard | cytosol | 70.71 | 84.34 |
| Bra001062.1-P | Field mustard | cytosol | 70.71 | 84.34 |
| AT5G16450.1 | Thale cress | cytosol | 70.71 | 84.34 |
| AT3G02770.1 | Thale cress | cytosol | 70.2 | 83.73 |
| CDX92011 | Canola | cytosol | 70.2 | 83.73 |
| CDX78691 | Canola | cytosol | 70.2 | 83.73 |
| Bra006355.1-P | Field mustard | cytosol | 69.7 | 83.13 |
| Zm00001d039841_P001 | Maize | extracellular | 64.65 | 76.19 |
| EES02468 | Sorghum | cytosol | 64.14 | 75.6 |
| Os02t0762100-01 | Rice | cytosol, plasma membrane | 63.13 | 74.4 |
| TraesCS7A01G558200.1 | Wheat | cytosol, plastid | 62.63 | 73.81 |
| HORVU1Hr1G058220.1 | Barley | cytosol | 19.19 | 73.08 |
| VIT_19s0015g01900.t01 | Wine grape | cytosol | 60.61 | 72.29 |
| TraesCS7D01G551600.1 | Wheat | cytosol, unclear | 61.11 | 72.02 |
| TraesCS7B01G483100.1 | Wheat | cytosol | 61.11 | 72.02 |
| HORVU1Hr1G045180.2 | Barley | cytosol | 22.73 | 70.31 |
| TraesCS7D01G552200.1 | Wheat | cytosol | 58.59 | 69.05 |
| HORVU5Hr1G024120.1 | Barley | cytosol | 31.31 | 67.39 |
| HORVU1Hr1G010560.1 | Barley | cytosol | 20.71 | 64.06 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 78.28 | 61.75 |
| HORVU1Hr1G040320.1 | Barley | cytosol | 27.27 | 61.36 |
| HORVU3Hr1G024340.2 | Barley | cytosol | 30.3 | 58.25 |
| HORVU3Hr1G110300.1 | Barley | cytosol | 31.31 | 54.87 |
| HORVU7Hr1G120490.20 | Barley | plastid | 74.75 | 54.61 |
| KXG31862 | Sorghum | cytosol | 48.99 | 54.49 |
| CDX96297 | Canola | cytosol | 21.21 | 51.22 |
| HORVU3Hr1G042110.1 | Barley | mitochondrion | 25.25 | 49.02 |
| HORVU5Hr1G074130.1 | Barley | cytosol | 33.84 | 44.97 |
Protein Annotations
| EntrezGene:100263339 | wikigene:100263339 | Gene3D:3.50.30.40 | MapMan:35.1 | EMBL:AM485148 | ProteinID:CAN79757 |
| ProteinID:CAN79757.1 | ProteinID:CCB44506 | ProteinID:CCB44506.1 | UniProt:F6GX20 | EMBL:FN594959 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008428 |
| GO:GO:0008948 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030234 | GO:GO:0043086 | GO:GO:0046872 |
| GO:GO:0047443 | GO:GO:0051252 | EntrezGene:LOC100263339 | wikigene:LOC100263339 | PFAM:PF03737 | PANTHER:PTHR33254 |
| PANTHER:PTHR33254:SF13 | InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | SUPFAM:SSF89562 | TIGR:TC52313 |
| TIGRFAMs:TIGR01935 | UniParc:UPI000210A314 | ArrayExpress:VIT_04s0023g00590 | EnsemblPlantsGene:VIT_04s0023g00590 | EnsemblPlants:VIT_04s0023g00590.t01 | unigene:Vvi.946 |
| RefSeq:XP_002277981 | RefSeq:XP_002277981.1 | : | : | : | : |
Description
4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:F6GX20]
Coordinates
chr4:-:16788083..16797020
Molecular Weight (calculated)
21544.9 Da
IEP (calculated)
6.522
GRAVY (calculated)
-0.180
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRKEKSQPK NDTRFISDSL QLESSPEGTW NRMALVTTAE VCDANPQLIV SGELRALQPV FQIYGRRPVF SGPIVTLKVF EDNVLIREFL EEKGNGRVLV
101: VDGGGSMRCA ILGGNPVVQA QNNGWAGIVV NGCIRDVDEI NGCDIGVRAL NSHPMKANKK GIGEKHVPIA IAGTRISDGE WLYADTDGIL ISRTELSV
101: VDGGGSMRCA ILGGNPVVQA QNNGWAGIVV NGCIRDVDEI NGCDIGVRAL NSHPMKANKK GIGEKHVPIA IAGTRISDGE WLYADTDGIL ISRTELSV
001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
Arabidopsis Description
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.