Factsheet for Zm00001d014883_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G551700.1	Wheat	cytosol	92.86	92.86
TraesCS7B01G483200.1	Wheat	cytosol	92.86	92.86
TraesCS7A01G558300.1	Wheat	cytosol, extracellular	92.86	92.86
Os02t0761900-01	Rice	cytosol, extracellular, plasma membrane, plastid	92.86	92.86
GSMUA_Achr3P14020_001	Banana	cytosol	92.26	92.26
GSMUA_Achr4P11830_001	Banana	cytosol	91.07	91.07
GSMUA_Achr4P05260_001	Banana	cytosol	78.57	90.41
KRH40302	Soybean	cytosol, nucleus	85.71	86.75
KRH00921	Soybean	cytosol	85.12	86.14
PGSC0003DMT400075872	Potato	cytosol	83.33	84.34
HORVU1Hr1G045180.2	Barley	cytosol	31.55	82.81
Zm00001d039841_P001	Maize	extracellular	82.74	82.74
AT5G16450.1	Thale cress	cytosol	79.17	80.12
CDX70694	Canola	cytosol	79.17	80.12
CDX78691	Canola	cytosol	79.17	80.12
HORVU1Hr1G010560.1	Barley	cytosol	30.36	79.69
CDY53745	Canola	cytosol	78.57	79.52
CDY69168	Canola	cytosol	78.57	79.52
CDX92011	Canola	cytosol	78.57	79.52
Bra001062.1-P	Field mustard	cytosol	78.57	79.52
Bra006355.1-P	Field mustard	cytosol	78.57	79.52
Bra021412.1-P	Field mustard	cytosol	78.57	79.52
CDX74237	Canola	cytosol	77.98	78.92
AT3G02770.1	Thale cress	cytosol	77.38	78.31
HORVU5Hr1G024120.1	Barley	cytosol	42.86	78.26
HORVU1Hr1G058220.1	Barley	cytosol	23.21	75.0
HORVU1Hr1G040320.1	Barley	cytosol	38.1	72.73
VIT_04s0023g00590.t01	Wine grape	cytosol	84.52	71.72
HORVU3Hr1G024340.2	Barley	cytosol	41.07	66.99
HORVU3Hr1G110300.1	Barley	cytosol	42.26	62.83
HORVU7Hr1G120490.20	Barley	plastid	92.86	57.56
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	83.33	55.78
CDX96297	Canola	cytosol	26.19	53.66
HORVU5Hr1G074130.1	Barley	cytosol	45.83	51.68
HORVU3Hr1G042110.1	Barley	mitochondrion	30.95	50.98

Protein Annotations

EntrezGene:100283919	Gene3D:3.50.30.40	MapMan:35.1	ProteinID:AQK67428.1	UniProt:B6TN41	EMBL:BT066085
EMBL:EU966406	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008428	GO:GO:0008948	GO:GO:0009987	GO:GO:0016829	GO:GO:0030234
GO:GO:0043086	GO:GO:0046872	GO:GO:0047443	GO:GO:0051252	PFAM:PF03737	PANTHER:PTHR33254
PANTHER:PTHR33254:SF15	InterPro:RraA	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	SUPFAM:SSF89562	TIGRFAMs:TIGR01935
UniParc:UPI000182DE0C	EnsemblPlantsGene:Zm00001d014883	EnsemblPlants:Zm00001d014883_P001	EnsemblPlants:Zm00001d014883_T001	:	:

Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2

Coordinates

chr5:-:66940918..66941424

Molecular Weight (calculated)

18118.0 Da

IEP (calculated)

6.098

GRAVY (calculated)

0.007

Length

168 amino acids

Sequence
(BLAST)

001: MAALPLATAE VCDANPHLIM NGELRALQPI FQIYGRRQVF AGPIVTLKVY EDNVLVREFL EEKGHGRVLV VDGGGSMRCA ILGGNPVQQA QNNGWAGILV
101: NGCIRDVDEI NGCDIGVRAL SSHPMKANKK GMGEKHVPVN IAGTRICDGE WLYADPDGIL VSRTELTV

Best Arabidopsis Sequence Match ( AT5G16450.2 )
(BLAST)

001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.