Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G024120.1 | Barley | cytosol | 90.38 | 51.09 |
| HORVU1Hr1G040320.1 | Barley | cytosol | 69.23 | 40.91 |
| HORVU3Hr1G024340.2 | Barley | cytosol | 69.23 | 34.95 |
| HORVU3Hr1G110300.1 | Barley | cytosol | 75.0 | 34.51 |
| HORVU3Hr1G042110.1 | Barley | mitochondrion | 67.31 | 34.31 |
| HORVU1Hr1G010560.1 | Barley | cytosol | 40.38 | 32.81 |
| HORVU1Hr1G045180.2 | Barley | cytosol | 40.38 | 32.81 |
| HORVU5Hr1G074130.1 | Barley | cytosol | 78.85 | 27.52 |
| GSMUA_Achr4P05260_001 | Banana | cytosol | 71.15 | 25.34 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 76.92 | 23.81 |
| TraesCS7D01G551700.1 | Wheat | cytosol | 76.92 | 23.81 |
| KRH00921 | Soybean | cytosol | 75.0 | 23.49 |
| KRH40302 | Soybean | cytosol, nucleus | 75.0 | 23.49 |
| PGSC0003DMT400075872 | Potato | cytosol | 75.0 | 23.49 |
| Zm00001d014883_P001 | Maize | cytosol, extracellular, mitochondrion | 75.0 | 23.21 |
| Os02t0761900-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 75.0 | 23.21 |
| TraesCS7A01G558300.1 | Wheat | cytosol, extracellular | 75.0 | 23.21 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 75.0 | 23.21 |
| GSMUA_Achr4P11830_001 | Banana | cytosol | 75.0 | 23.21 |
| AT3G02770.1 | Thale cress | cytosol | 69.23 | 21.69 |
| Bra001062.1-P | Field mustard | cytosol | 69.23 | 21.69 |
| Bra021412.1-P | Field mustard | cytosol | 69.23 | 21.69 |
| CDX74237 | Canola | cytosol | 69.23 | 21.69 |
| CDX92011 | Canola | cytosol | 69.23 | 21.69 |
| CDY53745 | Canola | cytosol | 69.23 | 21.69 |
| CDY69168 | Canola | cytosol | 69.23 | 21.69 |
| CDX78691 | Canola | cytosol | 67.31 | 21.08 |
| CDX70694 | Canola | cytosol | 67.31 | 21.08 |
| Bra006355.1-P | Field mustard | cytosol | 67.31 | 21.08 |
| AT5G16450.1 | Thale cress | cytosol | 65.38 | 20.48 |
| VIT_04s0023g00590.t01 | Wine grape | cytosol | 73.08 | 19.19 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 75.0 | 15.54 |
| HORVU7Hr1G120490.20 | Barley | plastid | 76.92 | 14.76 |
| CDX96297 | Canola | cytosol | 13.46 | 8.54 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G058220.1 | EnsemblPlantsGene:HORVU1Hr1G058220 | Gene3D:3.50.30.40 | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | PANTHER:PTHR33254 |
| PANTHER:PTHR33254:SF15 | PFAM:PF03737 | SUPFAM:SSF89562 | UniParc:UPI000B463F12 | UniProt:A0A287FSE2 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr1H:-:424993442..424993978
Molecular Weight (calculated)
5491.7 Da
IEP (calculated)
8.551
GRAVY (calculated)
-0.108
Length
52 amino acids
Sequence
(BLAST)
(BLAST)
1: MGPIVTLKVF EDNVVVREFL EEKGHGRVQV VNGGGSLRCS ILHGTKGGGA QN
001: MAFVTTAEVC DANQEMIRSG QLRALQPVFQ IYGRRQIFSG PVVTVKVFED NGLIRHFLEE KGNGRVLVVD GGGSLRCAIL GGNPVVQAQN NGWAGIIVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVSLNIA GTRICDGEWL YADTDGILVS QIELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVSLNIA GTRICDGEWL YADTDGILVS QIELSV
Arabidopsis Description
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8R9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.