Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G010560.1 | Barley | cytosol | 92.19 | 92.19 |
| HORVU5Hr1G024120.1 | Barley | cytosol | 92.19 | 64.13 |
| HORVU1Hr1G040320.1 | Barley | cytosol | 85.94 | 62.5 |
| HORVU3Hr1G024340.2 | Barley | cytosol | 92.19 | 57.28 |
| HORVU3Hr1G110300.1 | Barley | cytosol | 93.75 | 53.1 |
| HORVU1Hr1G058220.1 | Barley | cytosol | 32.81 | 40.38 |
| HORVU5Hr1G074130.1 | Barley | cytosol | 92.19 | 39.6 |
| GSMUA_Achr4P05260_001 | Banana | cytosol | 81.25 | 35.62 |
| HORVU3Hr1G042110.1 | Barley | mitochondrion | 56.25 | 35.29 |
| TraesCS7D01G551700.1 | Wheat | cytosol | 87.5 | 33.33 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 87.5 | 33.33 |
| TraesCS7A01G558300.1 | Wheat | cytosol, extracellular | 87.5 | 33.33 |
| Zm00001d014883_P001 | Maize | cytosol, extracellular, mitochondrion | 82.81 | 31.55 |
| GSMUA_Achr4P11830_001 | Banana | cytosol | 81.25 | 30.95 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 81.25 | 30.95 |
| Os02t0761900-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 78.12 | 29.76 |
| PGSC0003DMT400075872 | Potato | cytosol | 75.0 | 28.92 |
| KRH40302 | Soybean | cytosol, nucleus | 73.44 | 28.31 |
| KRH00921 | Soybean | cytosol | 73.44 | 28.31 |
| Bra006355.1-P | Field mustard | cytosol | 64.06 | 24.7 |
| CDX70694 | Canola | cytosol | 64.06 | 24.7 |
| CDX78691 | Canola | cytosol | 64.06 | 24.7 |
| CDX74237 | Canola | cytosol | 62.5 | 24.1 |
| Bra021412.1-P | Field mustard | cytosol | 62.5 | 24.1 |
| AT5G16450.1 | Thale cress | cytosol | 62.5 | 24.1 |
| CDX92011 | Canola | cytosol | 62.5 | 24.1 |
| CDY53745 | Canola | cytosol | 62.5 | 24.1 |
| CDY69168 | Canola | cytosol | 62.5 | 24.1 |
| Bra001062.1-P | Field mustard | cytosol | 62.5 | 24.1 |
| AT3G02770.1 | Thale cress | cytosol | 60.94 | 23.49 |
| VIT_04s0023g00590.t01 | Wine grape | cytosol | 70.31 | 22.73 |
| HORVU7Hr1G120490.20 | Barley | plastid | 89.06 | 21.03 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 75.0 | 19.12 |
| CDX96297 | Canola | cytosol | 7.81 | 6.1 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G045180.2 | EnsemblPlantsGene:HORVU1Hr1G045180 | Gene3D:3.50.30.40 | InterPro:RraA/RraA-like_sf | PANTHER:PTHR33254 | PANTHER:PTHR33254:SF15 |
| SUPFAM:SSF89562 | UniParc:UPI000B4817AC | UniProt:A0A287FDE4 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr1H:-:328243527..328244387
Molecular Weight (calculated)
7256.0 Da
IEP (calculated)
5.771
GRAVY (calculated)
0.163
Length
64 amino acids
Sequence
(BLAST)
(BLAST)
1: MAALPLTMAE VYDANSHLIT GGELRALQPI FKIYGRRQVF TGPIVMLKVF EDNVMVREFL EEKG
001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
Arabidopsis Description
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.