Factsheet for HORVU5Hr1G074130.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G045180.2	Barley	cytosol	39.6	92.19
HORVU1Hr1G010560.1	Barley	cytosol	38.93	90.62
HORVU5Hr1G024120.1	Barley	cytosol	55.03	89.13
HORVU1Hr1G040320.1	Barley	cytosol	49.66	84.09
HORVU1Hr1G058220.1	Barley	cytosol	27.52	78.85
HORVU3Hr1G024340.2	Barley	cytosol	50.34	72.82
HORVU3Hr1G110300.1	Barley	cytosol	52.35	69.03
HORVU3Hr1G042110.1	Barley	mitochondrion	36.91	53.92
TraesCS7D01G551700.1	Wheat	cytosol	55.03	48.81
TraesCS7B01G483200.1	Wheat	cytosol	55.03	48.81
TraesCS7A01G558300.1	Wheat	cytosol, extracellular	55.03	48.81
GSMUA_Achr4P05260_001	Banana	cytosol	46.98	47.95
Zm00001d014883_P001	Maize	cytosol, extracellular, mitochondrion	51.68	45.83
GSMUA_Achr4P11830_001	Banana	cytosol	50.34	44.64
GSMUA_Achr3P14020_001	Banana	cytosol	50.34	44.64
Os02t0761900-01	Rice	cytosol, extracellular, plasma membrane, plastid	50.34	44.64
PGSC0003DMT400075872	Potato	cytosol	48.32	43.37
KRH40302	Soybean	cytosol, nucleus	46.98	42.17
KRH00921	Soybean	cytosol	46.31	41.57
CDY69168	Canola	cytosol	42.95	38.55
CDY53745	Canola	cytosol	42.95	38.55
CDX74237	Canola	cytosol	42.95	38.55
Bra001062.1-P	Field mustard	cytosol	42.95	38.55
Bra021412.1-P	Field mustard	cytosol	42.95	38.55
CDX92011	Canola	cytosol	42.28	37.95
AT3G02770.1	Thale cress	cytosol	41.61	37.35
AT5G16450.1	Thale cress	cytosol	41.61	37.35
Bra006355.1-P	Field mustard	cytosol	41.61	37.35
CDX70694	Canola	cytosol	41.61	37.35
CDX78691	Canola	cytosol	41.61	37.35
VIT_04s0023g00590.t01	Wine grape	cytosol	44.97	33.84
HORVU7Hr1G120490.20	Barley	plastid	55.03	30.26
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	48.32	28.69
CDX96297	Canola	cytosol	7.38	13.41

Protein Annotations

EnsemblPlants:HORVU5Hr1G074130.1	EnsemblPlantsGene:HORVU5Hr1G074130	Gene3D:3.50.30.40	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	PANTHER:PTHR33254
PANTHER:PTHR33254:SF15	PFAM:PF03737	SEG:seg	SUPFAM:SSF89562	UniParc:UPI000B464A03	UniProt:A0A287RT56
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:542041770..542042315

Molecular Weight (calculated)

16665.8 Da

IEP (calculated)

11.292

GRAVY (calculated)

-0.198

Length

149 amino acids

Sequence
(BLAST)

001: MTALPLAMAE VYDANSHLIT GGELRVLQPI FKIYGRRQVF TGPIVTLKVF EDNVVVREFL EEKGQGRVLV VDGAGSLRCS ILHGTKGGGA RCCASHLEGL
101: HRPLCATSPH RRRRGRRCQG PRHPPLLCLL LRRPRALRLP PHPPLHRMY

Best Arabidopsis Sequence Match ( AT3G02770.1 )
(BLAST)

001: MAFVTTAEVC DANQEMIRSG QLRALQPVFQ IYGRRQIFSG PVVTVKVFED NGLIRHFLEE KGNGRVLVVD GGGSLRCAIL GGNPVVQAQN NGWAGIIVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVSLNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8R9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.