Factsheet for HORVU7Hr1G120490.20

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0761900-01	Rice	cytosol, extracellular, plasma membrane, plastid	57.93	93.45
Zm00001d014883_P001	Maize	cytosol, extracellular, mitochondrion	57.56	92.86
GSMUA_Achr4P11830_001	Banana	cytosol	56.46	91.07
GSMUA_Achr3P14020_001	Banana	cytosol	55.72	89.88
GSMUA_Achr4P05260_001	Banana	cytosol	48.34	89.73
HORVU1Hr1G045180.2	Barley	cytosol	21.03	89.06
PGSC0003DMT400075872	Potato	cytosol	53.51	87.35
KRH40302	Soybean	cytosol, nucleus	53.51	87.35
KRH00921	Soybean	cytosol	53.51	87.35
HORVU1Hr1G010560.1	Barley	cytosol	20.3	85.94
HORVU5Hr1G024120.1	Barley	cytosol	28.78	84.78
CDY69168	Canola	cytosol	49.45	80.72
AT5G16450.1	Thale cress	cytosol	49.45	80.72
Bra001062.1-P	Field mustard	cytosol	49.45	80.72
Bra021412.1-P	Field mustard	cytosol	49.45	80.72
CDX74237	Canola	cytosol	49.45	80.72
CDY53745	Canola	cytosol	49.45	80.72
CDX78691	Canola	cytosol	49.08	80.12
CDX70694	Canola	cytosol	49.08	80.12
CDX92011	Canola	cytosol	49.08	80.12
HORVU1Hr1G040320.1	Barley	cytosol	25.83	79.55
AT3G02770.1	Thale cress	cytosol	48.71	79.52
Bra006355.1-P	Field mustard	cytosol	48.71	79.52
HORVU1Hr1G058220.1	Barley	cytosol	14.76	76.92
VIT_04s0023g00590.t01	Wine grape	cytosol	54.61	74.75
HORVU3Hr1G024340.2	Barley	cytosol	27.68	72.82
HORVU3Hr1G110300.1	Barley	cytosol	30.26	72.57
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	53.87	58.17
HORVU5Hr1G074130.1	Barley	cytosol	30.26	55.03
HORVU3Hr1G042110.1	Barley	mitochondrion	20.3	53.92
CDX96297	Canola	cytosol	15.87	52.44

Protein Annotations

Gene3D:3.50.30.40	MapMan:35.1	UniProt:A0A287Y0K5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008428	GO:GO:0008948	GO:GO:0009987
GO:GO:0016829	GO:GO:0030234	GO:GO:0043086	GO:GO:0046872	GO:GO:0047443	GO:GO:0051252
EnsemblPlantsGene:HORVU7Hr1G120490	EnsemblPlants:HORVU7Hr1G120490.20	PFAM:PF03737	PANTHER:PTHR33254	PANTHER:PTHR33254:SF15	InterPro:RraA
InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	SUPFAM:SSF89562	TIGRFAMs:TIGR01935	UniParc:UPI000B46CD19	SEG:seg

Description

4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A287Y0K5]

Coordinates

chrchr7H:-:651489086..651490876

Molecular Weight (calculated)

29098.2 Da

IEP (calculated)

7.930

GRAVY (calculated)

-0.081

Length

271 amino acids

Sequence
(BLAST)

001: DLLLFHPSCS CSCRGLLVIR HPPTTPPSTS HHGKEKGKKE LPFFPPPPRI GSLPSPLIPF GGEVTVEWRS WTACAPPSAL RCLLAPHGGD THRRRAASPE
101: SATMAALPLA TAEVCDANSH LITGGELRAL QPIFQIYGRR QVFAGPIVTL KVFEDNVLVR EFLEEKGQGR VLVVDGGGSL RCAILGGNPV QQAQNNGWAG
201: IVVNGCIRDV DEINGCDIGV RALNSHPMKA NKKGMGEKHV PITIAGTRIC DGEWLYADTD GILVSRTELI V

Best Arabidopsis Sequence Match ( AT3G02770.1 )
(BLAST)

001: MAFVTTAEVC DANQEMIRSG QLRALQPVFQ IYGRRQIFSG PVVTVKVFED NGLIRHFLEE KGNGRVLVVD GGGSLRCAIL GGNPVVQAQN NGWAGIIVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVSLNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8R9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.