Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G02770.1 | Thale cress | cytosol | 95.18 | 95.18 |
| CDX70694 | Canola | cytosol | 95.18 | 95.18 |
| CDX78691 | Canola | cytosol | 95.18 | 95.18 |
| Bra006355.1-P | Field mustard | cytosol | 94.58 | 94.58 |
| KRH40302 | Soybean | cytosol, nucleus | 85.54 | 85.54 |
| PGSC0003DMT400075872 | Potato | cytosol | 84.94 | 84.94 |
| KRH00921 | Soybean | cytosol | 84.94 | 84.94 |
| TraesCS7A01G558300.1 | Wheat | cytosol, extracellular | 82.53 | 81.55 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 81.33 | 80.36 |
| TraesCS7D01G551700.1 | Wheat | cytosol | 81.33 | 80.36 |
| GSMUA_Achr4P11830_001 | Banana | cytosol | 81.33 | 80.36 |
| GSMUA_Achr4P05260_001 | Banana | cytosol | 70.48 | 80.14 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 80.72 | 79.76 |
| Zm00001d014883_P001 | Maize | cytosol, extracellular, mitochondrion | 80.12 | 79.17 |
| Os02t0761900-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 78.31 | 77.38 |
| EES02468 | Sorghum | cytosol | 74.1 | 73.21 |
| Zm00001d039841_P001 | Maize | extracellular | 73.49 | 72.62 |
| Os02t0762100-01 | Rice | cytosol, plasma membrane | 72.89 | 72.02 |
| TraesCS7A01G558200.1 | Wheat | cytosol, plastid | 72.29 | 71.43 |
| TraesCS7D01G551600.1 | Wheat | cytosol, unclear | 71.69 | 70.83 |
| VIT_04s0023g00590.t01 | Wine grape | cytosol | 84.34 | 70.71 |
| TraesCS7B01G483100.1 | Wheat | cytosol | 70.48 | 69.64 |
| TraesCS7D01G552200.1 | Wheat | cytosol | 68.07 | 67.26 |
| HORVU1Hr1G058220.1 | Barley | cytosol | 20.48 | 65.38 |
| HORVU1Hr1G045180.2 | Barley | cytosol | 24.1 | 62.5 |
| HORVU5Hr1G024120.1 | Barley | cytosol | 34.34 | 61.96 |
| HORVU1Hr1G040320.1 | Barley | cytosol | 30.72 | 57.95 |
| AT5G56260.4 | Thale cress | extracellular | 68.67 | 57.58 |
| HORVU1Hr1G010560.1 | Barley | cytosol | 21.69 | 56.25 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 84.94 | 56.18 |
| HORVU3Hr1G024340.2 | Barley | cytosol | 33.13 | 53.4 |
| KXG31862 | Sorghum | cytosol | 54.82 | 51.12 |
| HORVU3Hr1G110300.1 | Barley | cytosol | 33.73 | 49.56 |
| HORVU7Hr1G120490.20 | Barley | plastid | 80.72 | 49.45 |
| HORVU3Hr1G042110.1 | Barley | mitochondrion | 27.71 | 45.1 |
| HORVU5Hr1G074130.1 | Barley | cytosol | 37.35 | 41.61 |
Protein Annotations
| Gene3D:3.50.30.40 | MapMan:35.1 | EntrezGene:831506 | UniProt:A0A178UQH0 | ProteinID:AED92293.1 | ProteinID:AED92294.1 |
| EMBL:AK118745 | EMBL:AK317359 | ArrayExpress:AT5G16450 | EnsemblPlantsGene:AT5G16450 | RefSeq:AT5G16450 | TAIR:AT5G16450 |
| RefSeq:AT5G16450-TAIR-G | EnsemblPlants:AT5G16450.1 | TAIR:AT5G16450.1 | EMBL:AY085206 | Unigene:At.20374 | UniProt:B9DH14 |
| ProteinID:BAB09612.1 | EMBL:BT005566 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008428 | GO:GO:0008948 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0030234 | GO:GO:0043086 | GO:GO:0046872 | GO:GO:0047443 | GO:GO:0051252 | RefSeq:NP_197149.1 |
| RefSeq:NP_850830.1 | ProteinID:OAO95374.1 | PFAM:PF03737 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33254 |
| PANTHER:PTHR33254:SF13 | UniProt:Q9FFE0 | InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | SUPFAM:SSF89562 |
| TIGRFAMs:TIGR01935 | UniParc:UPI0000004208 | : | : | : | : |
Description
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
Coordinates
chr5:+:5373820..5375459
Molecular Weight (calculated)
17821.5 Da
IEP (calculated)
5.227
GRAVY (calculated)
0.051
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.