Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P05260_001 | Banana | cytosol | 83.33 | 95.89 |
| Zm00001d014883_P001 | Maize | cytosol, extracellular, mitochondrion | 91.07 | 91.07 |
| TraesCS7A01G558300.1 | Wheat | cytosol, extracellular | 90.48 | 90.48 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 90.48 | 90.48 |
| TraesCS7D01G551700.1 | Wheat | cytosol | 90.48 | 90.48 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 90.48 | 90.48 |
| Os02t0761900-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 88.69 | 88.69 |
| KRH00921 | Soybean | cytosol | 86.9 | 87.95 |
| KRH40302 | Soybean | cytosol, nucleus | 86.9 | 87.95 |
| PGSC0003DMT400075872 | Potato | cytosol | 86.31 | 87.35 |
| AT5G16450.1 | Thale cress | cytosol | 80.36 | 81.33 |
| HORVU1Hr1G045180.2 | Barley | cytosol | 30.95 | 81.25 |
| CDY69168 | Canola | cytosol | 79.76 | 80.72 |
| CDY53745 | Canola | cytosol | 79.76 | 80.72 |
| CDX78691 | Canola | cytosol | 79.76 | 80.72 |
| CDX70694 | Canola | cytosol | 79.76 | 80.72 |
| Bra021412.1-P | Field mustard | cytosol | 79.76 | 80.72 |
| Bra001062.1-P | Field mustard | cytosol | 79.76 | 80.72 |
| EES02468 | Sorghum | cytosol | 80.36 | 80.36 |
| AT3G02770.1 | Thale cress | cytosol | 79.17 | 80.12 |
| CDX74237 | Canola | cytosol | 79.17 | 80.12 |
| Bra006355.1-P | Field mustard | cytosol | 79.17 | 80.12 |
| CDX92011 | Canola | cytosol | 78.57 | 79.52 |
| Os02t0762100-01 | Rice | cytosol, plasma membrane | 78.57 | 78.57 |
| Zm00001d039841_P001 | Maize | extracellular | 78.57 | 78.57 |
| HORVU1Hr1G010560.1 | Barley | cytosol | 29.76 | 78.12 |
| TraesCS7A01G558200.1 | Wheat | cytosol, plastid | 77.38 | 77.38 |
| HORVU5Hr1G024120.1 | Barley | cytosol | 42.26 | 77.17 |
| TraesCS7B01G483100.1 | Wheat | cytosol | 76.19 | 76.19 |
| TraesCS7D01G551600.1 | Wheat | cytosol, unclear | 75.6 | 75.6 |
| HORVU1Hr1G058220.1 | Barley | cytosol | 23.21 | 75.0 |
| TraesCS7D01G552200.1 | Wheat | cytosol | 73.81 | 73.81 |
| VIT_04s0023g00590.t01 | Wine grape | cytosol | 86.9 | 73.74 |
| HORVU1Hr1G040320.1 | Barley | cytosol | 37.5 | 71.59 |
| GSMUA_Achr1P09370_001 | Banana | cytosol | 70.24 | 71.08 |
| HORVU3Hr1G024340.2 | Barley | cytosol | 40.48 | 66.02 |
| HORVU3Hr1G110300.1 | Barley | cytosol | 41.67 | 61.95 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 86.31 | 57.77 |
| HORVU7Hr1G120490.20 | Barley | plastid | 91.07 | 56.46 |
| KXG31862 | Sorghum | cytosol | 59.52 | 56.18 |
| HORVU3Hr1G042110.1 | Barley | mitochondrion | 31.55 | 51.96 |
| HORVU5Hr1G074130.1 | Barley | cytosol | 44.64 | 50.34 |
| CDX96297 | Canola | cytosol | 24.4 | 50.0 |
Protein Annotations
| Gene3D:3.50.30.40 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008428 | GO:GO:0008948 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0030234 | GO:GO:0043086 | GO:GO:0046872 | GO:GO:0047443 | GO:GO:0051252 | EnsemblPlantsGene:GSMUA_Achr4G11830_001 |
| EnsemblPlants:GSMUA_Achr4P11830_001 | EnsemblPlants:GSMUA_Achr4T11830_001 | UniProt:M0SN48 | PFAM:PF03737 | PANTHER:PTHR33254 | PANTHER:PTHR33254:SF13 |
| InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | SUPFAM:SSF89562 | TIGRFAMs:TIGR01935 | UniParc:UPI000295BC0B |
Description
Regulator of ribonuclease-like protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G11830_001]
Coordinates
chr4:-:8624904..8625684
Molecular Weight (calculated)
17991.8 Da
IEP (calculated)
6.098
GRAVY (calculated)
0.076
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALQLATAE VCDANPHLIL SGELRALHPI FQIYGRRQVF SGPIVTLKVF EDNVLVREFL EEKGNGRVLV VDGGGSMRCA ILGGNPVQQA QNNGWAGIVV
101: NGCIRDVDEI NGCDIGVRAL ASHPMKANKK GIGEKHAAIN VAGTRICDGE WLYADTDGIL VSRTELTV
101: NGCIRDVDEI NGCDIGVRAL ASHPMKANKK GIGEKHAAIN VAGTRICDGE WLYADTDGIL VSRTELTV
001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
Arabidopsis Description
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.