Factsheet for HORVU1Hr1G040320.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G010560.1	Barley	cytosol	64.77	89.06
HORVU1Hr1G045180.2	Barley	cytosol	62.5	85.94
HORVU5Hr1G024120.1	Barley	cytosol	85.23	81.52
HORVU1Hr1G058220.1	Barley	cytosol	40.91	69.23
HORVU3Hr1G024340.2	Barley	cytosol	80.68	68.93
HORVU3Hr1G110300.1	Barley	cytosol	84.09	65.49
HORVU3Hr1G042110.1	Barley	mitochondrion	57.95	50.0
HORVU5Hr1G074130.1	Barley	cytosol	84.09	49.66
GSMUA_Achr4P05260_001	Banana	cytosol	69.32	41.78
TraesCS7D01G551700.1	Wheat	cytosol	78.41	41.07
TraesCS7B01G483200.1	Wheat	cytosol	78.41	41.07
TraesCS7A01G558300.1	Wheat	cytosol, extracellular	78.41	41.07
Zm00001d014883_P001	Maize	cytosol, extracellular, mitochondrion	72.73	38.1
Os02t0761900-01	Rice	cytosol, extracellular, plasma membrane, plastid	72.73	38.1
GSMUA_Achr3P14020_001	Banana	cytosol	72.73	38.1
GSMUA_Achr4P11830_001	Banana	cytosol	71.59	37.5
PGSC0003DMT400075872	Potato	cytosol	67.05	35.54
KRH00921	Soybean	cytosol	63.64	33.73
KRH40302	Soybean	cytosol, nucleus	63.64	33.73
CDX92011	Canola	cytosol	59.09	31.33
CDX78691	Canola	cytosol	59.09	31.33
CDX74237	Canola	cytosol	59.09	31.33
CDX70694	Canola	cytosol	59.09	31.33
CDY53745	Canola	cytosol	59.09	31.33
Bra021412.1-P	Field mustard	cytosol	59.09	31.33
CDY69168	Canola	cytosol	59.09	31.33
Bra006355.1-P	Field mustard	cytosol	59.09	31.33
Bra001062.1-P	Field mustard	cytosol	59.09	31.33
AT5G16450.1	Thale cress	cytosol	57.95	30.72
AT3G02770.1	Thale cress	cytosol	57.95	30.72
VIT_04s0023g00590.t01	Wine grape	cytosol	61.36	27.27
HORVU7Hr1G120490.20	Barley	plastid	79.55	25.83
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	67.05	23.51
CDX96297	Canola	cytosol	11.36	12.2

Protein Annotations

EnsemblPlants:HORVU1Hr1G040320.1	EnsemblPlantsGene:HORVU1Hr1G040320	Gene3D:3.50.30.40	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	PANTHER:PTHR33254
PANTHER:PTHR33254:SF15	PFAM:PF03737	SUPFAM:SSF89562	UniParc:UPI000B4874AA	UniProt:A0A287F8F9	MapMan:35.1

Description

No Description!

Coordinates

chrchr1H:-:284946571..284947116

Molecular Weight (calculated)

9730.0 Da

IEP (calculated)

6.778

GRAVY (calculated)

0.298

Length

88 amino acids

Sequence
(BLAST)

1: MVALPLAMAE FYDANSHLIT GGELRALQLI FKIYGRRQVF TGPIVTLKVF EDNMVVHELL EEKGQDRVLV VDGGGSLRCS ILHGTKVC

Best Arabidopsis Sequence Match ( AT3G02770.1 )
(BLAST)

001: MAFVTTAEVC DANQEMIRSG QLRALQPVFQ IYGRRQIFSG PVVTVKVFED NGLIRHFLEE KGNGRVLVVD GGGSLRCAIL GGNPVVQAQN NGWAGIIVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVSLNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8R9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.