Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70694 | Canola | cytosol | 62.2 | 30.72 |
| CDY32800 | Canola | cytosol | 28.05 | 30.67 |
| CDY62102 | Canola | cytosol | 32.93 | 30.34 |
| CDX78691 | Canola | cytosol | 60.98 | 30.12 |
| CDY69168 | Canola | cytosol | 59.76 | 29.52 |
| CDY53745 | Canola | cytosol | 59.76 | 29.52 |
| CDX74237 | Canola | cytosol | 58.54 | 28.92 |
| CDX92011 | Canola | cytosol | 58.54 | 28.92 |
| TraesCS7D01G551700.1 | Wheat | cytosol | 53.66 | 26.19 |
| TraesCS7A01G558300.1 | Wheat | cytosol, extracellular | 53.66 | 26.19 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 53.66 | 26.19 |
| Zm00001d014883_P001 | Maize | cytosol, extracellular, mitochondrion | 53.66 | 26.19 |
| KRH40302 | Soybean | cytosol, nucleus | 52.44 | 25.9 |
| KRH00921 | Soybean | cytosol | 52.44 | 25.9 |
| Os02t0761900-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 52.44 | 25.6 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 51.22 | 25.0 |
| TraesCS7A01G558200.1 | Wheat | cytosol, plastid | 51.22 | 25.0 |
| Os02t0762100-01 | Rice | cytosol, plasma membrane | 51.22 | 25.0 |
| PGSC0003DMT400075872 | Potato | cytosol | 50.0 | 24.7 |
| GSMUA_Achr4P11830_001 | Banana | cytosol | 50.0 | 24.4 |
| TraesCS7D01G551600.1 | Wheat | cytosol, unclear | 48.78 | 23.81 |
| TraesCS7B01G483100.1 | Wheat | cytosol | 48.78 | 23.81 |
| CDY36787 | Canola | cytosol | 47.56 | 23.49 |
| CDY11948 | Canola | cytosol | 47.56 | 23.49 |
| Zm00001d039841_P001 | Maize | extracellular | 47.56 | 23.21 |
| EES02468 | Sorghum | cytosol | 46.34 | 22.62 |
| TraesCS7D01G552200.1 | Wheat | cytosol | 46.34 | 22.62 |
| CDY06513 | Canola | cytosol | 45.12 | 22.29 |
| CDY20739 | Canola | cytosol | 45.12 | 22.29 |
| VIT_04s0023g00590.t01 | Wine grape | cytosol | 51.22 | 21.21 |
| GSMUA_Achr4P05260_001 | Banana | cytosol | 30.49 | 17.12 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 50.0 | 16.33 |
| HORVU7Hr1G120490.20 | Barley | plastid | 52.44 | 15.87 |
| KXG31862 | Sorghum | cytosol | 32.93 | 15.17 |
| HORVU1Hr1G058220.1 | Barley | cytosol | 8.54 | 13.46 |
| HORVU1Hr1G040320.1 | Barley | cytosol | 12.2 | 11.36 |
| HORVU5Hr1G024120.1 | Barley | cytosol | 12.2 | 10.87 |
| HORVU3Hr1G110300.1 | Barley | cytosol | 13.41 | 9.73 |
| HORVU3Hr1G042110.1 | Barley | mitochondrion | 9.76 | 7.84 |
| HORVU1Hr1G045180.2 | Barley | cytosol | 6.1 | 7.81 |
| HORVU5Hr1G074130.1 | Barley | cytosol | 13.41 | 7.38 |
| HORVU3Hr1G024340.2 | Barley | cytosol | 8.54 | 6.8 |
| HORVU1Hr1G010560.1 | Barley | cytosol | 4.88 | 6.25 |
Protein Annotations
| EnsemblPlants:CDX96297 | EnsemblPlantsGene:GSBRNA2T00102439001 | Gene3D:3.50.30.40 | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | PANTHER:PTHR33254 |
| PANTHER:PTHR33254:SF13 | PFAM:PF03737 | ProteinID:CDX96297 | ProteinID:CDX96297.1 | SUPFAM:SSF89562 | UniParc:UPI0004EEC3B7 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA07g29080D
Coordinates
chrLK031894:-:174711..175199
Molecular Weight (calculated)
9168.9 Da
IEP (calculated)
4.450
GRAVY (calculated)
-0.238
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MAVKSGKVDR ECWELFLRKF AGELDKGESV SYEIKGLYLP WSKEGLGEQR VPVNIAGTRI CDGEWVYADT DGILVSQTEL SV
001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV
Arabidopsis Description
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.