Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002829.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY62102 | Canola | cytosol | 81.33 | 68.54 |
| Solyc10g005670.1.1 | Tomato | plastid | 61.33 | 50.0 |
| CDY06513 | Canola | cytosol | 76.0 | 34.34 |
| CDY11948 | Canola | cytosol | 76.0 | 34.34 |
| CDY20739 | Canola | cytosol | 76.0 | 34.34 |
| CDY36787 | Canola | cytosol | 76.0 | 34.34 |
| PGSC0003DMT400029207 | Potato | cytosol | 62.67 | 28.31 |
| CDX96297 | Canola | cytosol | 30.67 | 28.05 |
| VIT_19s0015g01900.t01 | Wine grape | cytosol | 61.33 | 27.71 |
| GSMUA_Achr1P09370_001 | Banana | cytosol | 60.0 | 27.11 |
| CDX70694 | Canola | cytosol | 58.67 | 26.51 |
| CDX78691 | Canola | cytosol | 58.67 | 26.51 |
| CDY69168 | Canola | cytosol | 56.0 | 25.3 |
| CDY53745 | Canola | cytosol | 56.0 | 25.3 |
| CDX74237 | Canola | cytosol | 56.0 | 25.3 |
| CDX92011 | Canola | cytosol | 54.67 | 24.7 |
| PGSC0003DMT400090515 | Potato | cytosol | 56.0 | 23.46 |
| KRH21645 | Soybean | mitochondrion | 58.67 | 21.67 |
| KRH10689 | Soybean | extracellular, plasma membrane, plastid | 58.67 | 20.95 |
Protein Annotations
| EnsemblPlants:CDY32800 | EnsemblPlantsGene:GSBRNA2T00052874001 | Gene3D:3.50.30.40 | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | PANTHER:PTHR33254 |
| PANTHER:PTHR33254:SF3 | PFAM:PF03737 | ProteinID:CDY32800 | ProteinID:CDY32800.1 | SUPFAM:SSF89562 | UniParc:UPI0002544861 |
| UniProt:A0A078H2F1 | MapMan:35.1 | : | : | : | : |
Description
BnaA10g10490DBnaA10g10490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2F1]
Coordinates
chrLK032299:+:373370..373597
Molecular Weight (calculated)
8081.7 Da
IEP (calculated)
4.267
GRAVY (calculated)
0.161
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MVNGCVSDVD EINECDVGVR ALGSDPLQSS KKGHCEKYVV VYIGGTLIRD GEWLCVDSNG VLISKTELSV SFTML
001: MAAFATAEAC DSNAELISNG DLRALHPIFK IYGQRRCFSG PIVTLKVFED NVLVRNQLET KGEGGVLVID GGGSMRCALV GGNLGQLAQN NGWSGIVVNG
101: CVRDVDEIND CDVGVRALGS NPLKSTKKGH GEKNVPVHIG GTLIRDGEWL YADSDGILIS KTELSV
101: CVRDVDEIND CDVGVRALGS NPLKSTKKGH GEKNVPVHIG GTLIRDGEWL YADSDGILIS KTELSV
Arabidopsis Description
Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [Source:TAIR;Acc:AT5G56260]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.