CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028940.1-P	Field mustard	cytosol	100.0	100.0
CDY11948	Canola	cytosol	99.4	99.4
CDY20739	Canola	cytosol	95.78	95.78
CDY06513	Canola	cytosol	95.18	95.18
AT5G56260.4	Thale cress	extracellular	97.59	81.82
PGSC0003DMT400029207	Potato	cytosol	79.52	79.52
Solyc10g005670.1.1	Tomato	plastid	43.98	79.35
VIT_19s0015g01900.t01	Wine grape	cytosol	78.92	78.92
CDY32800	Canola	cytosol	34.34	76.0
GSMUA_Achr1P09370_001	Banana	cytosol	74.1	74.1
CDY62102	Canola	cytosol	37.35	69.66
CDY53745	Canola	cytosol	68.07	68.07
CDY69168	Canola	cytosol	68.07	68.07
CDX78691	Canola	cytosol	68.07	68.07
CDX70694	Canola	cytosol	68.07	68.07
CDX92011	Canola	cytosol	67.47	67.47
CDX74237	Canola	cytosol	67.47	67.47
PGSC0003DMT400090515	Potato	cytosol	65.06	60.34
KRH21645	Soybean	mitochondrion	69.88	57.14
KRH10689	Soybean	extracellular, plasma membrane, plastid	71.08	56.19
CDX96297	Canola	cytosol	23.49	47.56

Protein Annotations

Gene3D:3.50.30.40	MapMan:35.1	GO:A0A078HG44	UniProt:A0A078HG44	EnsemblPlants:CDY36787	ProteinID:CDY36787
ProteinID:CDY36787.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008428	GO:GO:0008948	GO:GO:0009987	GO:GO:0016829	GO:GO:0030234
GO:GO:0043086	GO:GO:0046872	GO:GO:0047443	GO:GO:0051252	EnsemblPlantsGene:GSBRNA2T00062619001	PFAM:PF03737
PANTHER:PTHR33254	PANTHER:PTHR33254:SF3	InterPro:RraA	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	SUPFAM:SSF89562
TIGRFAMs:TIGR01935	UniParc:UPI000253FD9D	SEG:seg	:	:	:

Description

BnaA03g10990D4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A078HG44]

Coordinates

chrLK032383:-:262623..264412

Molecular Weight (calculated)

17557.0 Da

IEP (calculated)

4.950

GRAVY (calculated)

0.001

Length

166 amino acids

Sequence
(BLAST)

001: MAAFATAEAC DSNAELISNG DLRALHPIFK IYGQRRCFSG PIVTLKVFED NVLVRNQLET KGEGAVLVID GGGSMRCALV GGNLGQLAQN NGWVGIVVNG
101: CVRDVDEIND CDVGVRALGS NPLKSSKKGH GEKNVPVNIG GTLIRDGEWL YADSDGILIS KTELSV

Best Arabidopsis Sequence Match ( AT5G56260.4 )
(BLAST)

001: MFTLFCYFHF FLSVPYSYLS CDSKCRTHTE SPMAAFATAE ACDSNAELIS NGDLRALHPI FKIYGQRRCF SGPIVTLKVF EDNVLVRNQL ETKGEGGVLV
101: IDGGGSMRCA LVGGNLGQLA QNNGWSGIVV NGCVRDVDEI NDCDVGVRAL GSNPLKSTKK GHGEKNVPVH IGGTLIRDGE WLYADSDGIL ISKTELSV

Arabidopsis Description

Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [Source:TAIR;Acc:AT5G56260]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.