Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 2
- nucleus 1
- mitochondrion 2
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH21645 | Soybean | mitochondrion | 76.19 | 78.82 |
Solyc10g005670.1.1 | Tomato | plastid | 33.33 | 76.09 |
PGSC0003DMT400029207 | Potato | cytosol | 59.52 | 75.3 |
Bra035612.1-P | Field mustard | cytosol | 58.1 | 73.49 |
VIT_19s0015g01900.t01 | Wine grape | cytosol | 58.1 | 73.49 |
CDY06513 | Canola | cytosol | 57.62 | 72.89 |
CDY20739 | Canola | cytosol | 57.14 | 72.29 |
CDY11948 | Canola | cytosol | 56.67 | 71.69 |
Bra028940.1-P | Field mustard | cytosol | 56.19 | 71.08 |
CDY36787 | Canola | cytosol | 56.19 | 71.08 |
GSMUA_Achr1P09370_001 | Banana | cytosol | 54.76 | 69.28 |
KRH40302 | Soybean | cytosol, nucleus | 52.86 | 66.87 |
KRH00921 | Soybean | cytosol | 52.38 | 66.27 |
AT5G56260.4 | Thale cress | extracellular | 59.05 | 62.63 |
Bra002829.1-P | Field mustard | cytosol | 20.95 | 58.67 |
CDY32800 | Canola | cytosol | 20.95 | 58.67 |
PGSC0003DMT400090515 | Potato | cytosol | 49.05 | 57.54 |
CDY62102 | Canola | cytosol | 23.33 | 55.06 |
Protein Annotations
EntrezGene:100500019 | Gene3D:3.50.30.40 | MapMan:35.1 | EMBL:ACUP02009152 | EnsemblPlantsGene:GLYMA_15G063400 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008428 |
GO:GO:0008948 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030234 | GO:GO:0043086 | GO:GO:0046872 |
GO:GO:0047443 | GO:GO:0051252 | UniProt:I1ME62 | EnsemblPlants:KRH10689 | ProteinID:KRH10689 | ProteinID:KRH10689.1 |
PFAM:PF03737 | PANTHER:PTHR33254 | PANTHER:PTHR33254:SF3 | InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf |
SUPFAM:SSF89562 | TIGRFAMs:TIGR01935 | UniParc:UPI00023D26BE | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr15:-:4847887..4849531
Molecular Weight (calculated)
22556.4 Da
IEP (calculated)
7.812
GRAVY (calculated)
0.236
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLRCRSRGT PIPFNLSFLF SSSLSNHPFI PFLLALCPLG GVCNMAALPT AELSDANATH VASGDVRVLH PVFKVYGQAT AFSGPIVTVK VFEDNVLVRE
101: LVETKGEGRV LVVDGGGSLR CALMGGNLVQ IAYNMGWAGI VVNGCVRDVD DINACNIGVR ALASHPLRSN KKRTGEKNVP VYVGGTFIRE GEWLYADNDG
201: ILVSKFELSN
101: LVETKGEGRV LVVDGGGSLR CALMGGNLVQ IAYNMGWAGI VVNGCVRDVD DINACNIGVR ALASHPLRSN KKRTGEKNVP VYVGGTFIRE GEWLYADNDG
201: ILVSKFELSN
001: MAAFATAEAC DSNAELISNG DLRALHPIFK IYGQRRCFSG PIVTLKVFED NVLVRNQLET KGEGGVLVID GGGSMRCALV GGNLGQLAQN NGWSGIVVNG
101: CVRDVDEIND CDVGVRALGS NPLKSTKKGH GEKNVPVHIG GTLIRDGEWL YADSDGILIS KTELSV
101: CVRDVDEIND CDVGVRALGS NPLKSTKKGH GEKNVPVHIG GTLIRDGEWL YADSDGILIS KTELSV
Arabidopsis Description
Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [Source:TAIR;Acc:AT5G56260]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.