Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06513 | Canola | cytosol | 97.59 | 97.59 |
| CDY36787 | Canola | cytosol | 95.78 | 95.78 |
| CDY11948 | Canola | cytosol | 95.18 | 95.18 |
| VIT_19s0015g01900.t01 | Wine grape | cytosol | 80.72 | 80.72 |
| Solyc10g005670.1.1 | Tomato | plastid | 44.58 | 80.43 |
| AT5G56260.4 | Thale cress | extracellular | 95.18 | 79.8 |
| PGSC0003DMT400029207 | Potato | cytosol | 79.52 | 79.52 |
| CDY32800 | Canola | cytosol | 34.34 | 76.0 |
| GSMUA_Achr1P09370_001 | Banana | cytosol | 74.1 | 74.1 |
| CDY62102 | Canola | cytosol | 37.35 | 69.66 |
| CDY53745 | Canola | cytosol | 68.07 | 68.07 |
| CDY69168 | Canola | cytosol | 68.07 | 68.07 |
| CDX78691 | Canola | cytosol | 68.07 | 68.07 |
| CDX74237 | Canola | cytosol | 68.07 | 68.07 |
| CDX70694 | Canola | cytosol | 68.07 | 68.07 |
| CDX92011 | Canola | cytosol | 67.47 | 67.47 |
| PGSC0003DMT400090515 | Potato | cytosol | 65.66 | 60.89 |
| KRH21645 | Soybean | mitochondrion | 71.08 | 58.13 |
| KRH10689 | Soybean | extracellular, plasma membrane, plastid | 72.29 | 57.14 |
| CDX96297 | Canola | cytosol | 22.29 | 45.12 |
Protein Annotations
| Gene3D:3.50.30.40 | MapMan:35.1 | GO:A0A078G5S9 | UniProt:A0A078G5S9 | EnsemblPlants:CDY20739 | ProteinID:CDY20739 |
| ProteinID:CDY20739.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008428 | GO:GO:0008948 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030234 |
| GO:GO:0043086 | GO:GO:0046872 | GO:GO:0047443 | GO:GO:0051252 | EnsemblPlantsGene:GSBRNA2T00012960001 | PFAM:PF03737 |
| PANTHER:PTHR33254 | PANTHER:PTHR33254:SF3 | InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | SUPFAM:SSF89562 |
| TIGRFAMs:TIGR01935 | UniParc:UPI0004EF3297 | SEG:seg | : | : | : |
Description
BnaA02g08790D4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A078G5S9]
Coordinates
chrLK032111:+:367911..369346
Molecular Weight (calculated)
17600.0 Da
IEP (calculated)
5.241
GRAVY (calculated)
-0.040
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFATAEAC DSNAELIANG DLRALHPIFN IYGQRRCFSG PIVTLKVFED NVLVRNQLET KGEGRVLVID GGGSKRCALV GGNLGQLAQN NGWAGIVVNG
101: CVRDVDEIND CDVGVRALGS NPLKSSKKGH GEKNVPVYIG GALIRDGEWL YADSDGILIS KTELSV
101: CVRDVDEIND CDVGVRALGS NPLKSSKKGH GEKNVPVYIG GALIRDGEWL YADSDGILIS KTELSV
001: MFTLFCYFHF FLSVPYSYLS CDSKCRTHTE SPMAAFATAE ACDSNAELIS NGDLRALHPI FKIYGQRRCF SGPIVTLKVF EDNVLVRNQL ETKGEGGVLV
101: IDGGGSMRCA LVGGNLGQLA QNNGWSGIVV NGCVRDVDEI NDCDVGVRAL GSNPLKSTKK GHGEKNVPVH IGGTLIRDGE WLYADSDGIL ISKTELSV
101: IDGGGSMRCA LVGGNLGQLA QNNGWSGIVV NGCVRDVDEI NDCDVGVRAL GSNPLKSTKK GHGEKNVPVH IGGTLIRDGE WLYADSDGIL ISKTELSV
Arabidopsis Description
Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [Source:TAIR;Acc:AT5G56260]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.