Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g005670.1.1 | Tomato | plastid | 54.22 | 97.83 |
| VIT_19s0015g01900.t01 | Wine grape | cytosol | 84.94 | 84.94 |
| CDY11948 | Canola | cytosol | 80.12 | 80.12 |
| CDY36787 | Canola | cytosol | 79.52 | 79.52 |
| CDY20739 | Canola | cytosol | 79.52 | 79.52 |
| Bra028940.1-P | Field mustard | cytosol | 79.52 | 79.52 |
| Bra035612.1-P | Field mustard | cytosol | 78.92 | 78.92 |
| GSMUA_Achr1P09370_001 | Banana | cytosol | 78.31 | 78.31 |
| CDY06513 | Canola | cytosol | 77.71 | 77.71 |
| PGSC0003DMT400090515 | Potato | cytosol | 78.31 | 72.63 |
| PGSC0003DMT400075872 | Potato | cytosol | 71.08 | 71.08 |
| AT5G56260.4 | Thale cress | extracellular | 79.52 | 66.67 |
| CDY32800 | Canola | cytosol | 28.31 | 62.67 |
| Bra002829.1-P | Field mustard | cytosol | 28.31 | 62.67 |
| KRH21645 | Soybean | mitochondrion | 75.3 | 61.58 |
| KRH10689 | Soybean | extracellular, plasma membrane, plastid | 75.3 | 59.52 |
| CDY62102 | Canola | cytosol | 30.72 | 57.3 |
Protein Annotations
| EntrezGene:102584527 | Gene3D:3.50.30.40 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008428 | GO:GO:0008948 | GO:GO:0009987 |
| GO:GO:0016829 | GO:GO:0030234 | GO:GO:0043086 | GO:GO:0046872 | GO:GO:0047443 | GO:GO:0051252 |
| UniProt:M1ASF0 | PFAM:PF03737 | EnsemblPlantsGene:PGSC0003DMG400011236 | PGSC:PGSC0003DMG400011236 | EnsemblPlants:PGSC0003DMT400029207 | PANTHER:PTHR33254 |
| PANTHER:PTHR33254:SF3 | InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | SUPFAM:SSF89562 | TIGRFAMs:TIGR01935 |
| UniParc:UPI00029510CE | RefSeq:XP_006352573.1 | RefSeq:XP_006352574.1 | : | : | : |
Description
Regulator of ribonuclease activity A [Source:PGSC_GENE;Acc:PGSC0003DMG400011236]
Coordinates
chr10:-:726909..730007
Molecular Weight (calculated)
17672.4 Da
IEP (calculated)
4.960
GRAVY (calculated)
0.065
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLATAEVC DVNAGDLSNG DLRVLPPVFK IYGQCRAFSG PITTLKVFED NVLVRELLET RGEGRVLVID GGGSMRCALV GGNLGQLAQN MGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPQKSNKKGQ GEKHVPIYIG GMLIREGEWL YADSDGILVS KTELSI
101: CIRDVDEING CDIGVRALAS HPQKSNKKGQ GEKHVPIYIG GMLIREGEWL YADSDGILVS KTELSI
001: MFTLFCYFHF FLSVPYSYLS CDSKCRTHTE SPMAAFATAE ACDSNAELIS NGDLRALHPI FKIYGQRRCF SGPIVTLKVF EDNVLVRNQL ETKGEGGVLV
101: IDGGGSMRCA LVGGNLGQLA QNNGWSGIVV NGCVRDVDEI NDCDVGVRAL GSNPLKSTKK GHGEKNVPVH IGGTLIRDGE WLYADSDGIL ISKTELSV
101: IDGGGSMRCA LVGGNLGQLA QNNGWSGIVV NGCVRDVDEI NDCDVGVRAL GSNPLKSTKK GHGEKNVPVH IGGTLIRDGE WLYADSDGIL ISKTELSV
Arabidopsis Description
Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [Source:TAIR;Acc:AT5G56260]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.