Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 5
- nucleus 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g005670.1.1 | Tomato | plastid | 35.47 | 78.26 |
| KRH10689 | Soybean | extracellular, plasma membrane, plastid | 78.82 | 76.19 |
| PGSC0003DMT400029207 | Potato | cytosol | 61.58 | 75.3 |
| VIT_19s0015g01900.t01 | Wine grape | cytosol | 60.1 | 73.49 |
| Bra035612.1-P | Field mustard | cytosol | 59.11 | 72.29 |
| CDY06513 | Canola | cytosol | 58.62 | 71.69 |
| CDY20739 | Canola | cytosol | 58.13 | 71.08 |
| CDY11948 | Canola | cytosol | 57.64 | 70.48 |
| Bra028940.1-P | Field mustard | cytosol | 57.14 | 69.88 |
| CDY36787 | Canola | cytosol | 57.14 | 69.88 |
| GSMUA_Achr1P09370_001 | Banana | cytosol | 56.65 | 69.28 |
| KRH40302 | Soybean | cytosol, nucleus | 54.68 | 66.87 |
| KRH00921 | Soybean | cytosol | 54.19 | 66.27 |
| AT5G56260.4 | Thale cress | extracellular | 58.62 | 60.1 |
| Bra002829.1-P | Field mustard | cytosol | 21.67 | 58.67 |
| CDY32800 | Canola | cytosol | 21.67 | 58.67 |
| PGSC0003DMT400090515 | Potato | cytosol | 50.74 | 57.54 |
| CDY62102 | Canola | cytosol | 24.14 | 55.06 |
Protein Annotations
| EntrezGene:100789908 | Gene3D:3.50.30.40 | MapMan:35.1 | EMBL:ACUP02008360 | EnsemblPlantsGene:GLYMA_13G250900 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008428 |
| GO:GO:0008948 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030234 | GO:GO:0043086 | GO:GO:0046872 |
| GO:GO:0047443 | GO:GO:0051252 | UniProt:I1M2G9 | EnsemblPlants:KRH21645 | ProteinID:KRH21645 | ProteinID:KRH21645.1 |
| PFAM:PF03737 | PANTHER:PTHR33254 | PANTHER:PTHR33254:SF3 | InterPro:RraA | InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf |
| SUPFAM:SSF89562 | TIGRFAMs:TIGR01935 | UniParc:UPI00023CE9AD | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:35819604..35821065
Molecular Weight (calculated)
21747.3 Da
IEP (calculated)
7.028
GRAVY (calculated)
0.242
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLRYTPISF IIPRPLHFPT TNSLFFFSPS AVGGVCNMAA LPTAELSDAN ATHVASCDVR VLHPVFKVYG GATAFSGPVV TVKVFEDNVL VRELLETKGE
101: GRVLVVDGGG SLRCALVGGN LALIAHNMGW AGIVVNGCIR DVDEINASDI GVRALASHPL RSNKKRTGEK NVPVYVGGTF IREGEWLYAD NDGILVSKFE
201: LSN
101: GRVLVVDGGG SLRCALVGGN LALIAHNMGW AGIVVNGCIR DVDEINASDI GVRALASHPL RSNKKRTGEK NVPVYVGGTF IREGEWLYAD NDGILVSKFE
201: LSN
001: MFTLFCYFHF FLSVPYSYLS CDSKCRTHTE SPMAAFATAE ACDSNAELIS NGDLRALHPI FKIYGQRRCF SGPIVTLKVF EDNVLVRNQL ETKGEGGVLV
101: IDGGGSMRCA LVGGNLGQLA QNNGWSGIVV NGCVRDVDEI NDCDVGVRAL GSNPLKSTKK GHGEKNVPVH IGGTLIRDGE WLYADSDGIL ISKTELSV
101: IDGGGSMRCA LVGGNLGQLA QNNGWSGIVV NGCVRDVDEI NDCDVGVRAL GSNPLKSTKK GHGEKNVPVH IGGTLIRDGE WLYADSDGIL ISKTELSV
Arabidopsis Description
Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [Source:TAIR;Acc:AT5G56260]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.