CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021412.1-P	Field mustard	cytosol	100.0	100.0
CDY53745	Canola	cytosol	100.0	100.0
CDX74237	Canola	cytosol	97.59	97.59
CDX92011	Canola	cytosol	96.99	96.99
AT3G02770.1	Thale cress	cytosol	96.39	96.39
CDX70694	Canola	cytosol	95.78	95.78
CDX78691	Canola	cytosol	95.18	95.18
KRH00921	Soybean	cytosol	86.75	86.75
KRH40302	Soybean	cytosol, nucleus	85.54	85.54
PGSC0003DMT400075872	Potato	cytosol	84.94	84.94
TraesCS7A01G558300.1	Wheat	cytosol, extracellular	81.93	80.95
GSMUA_Achr4P05260_001	Banana	cytosol	71.08	80.82
TraesCS7D01G551700.1	Wheat	cytosol	81.33	80.36
TraesCS7B01G483200.1	Wheat	cytosol	81.33	80.36
GSMUA_Achr3P14020_001	Banana	cytosol	80.72	79.76
GSMUA_Achr4P11830_001	Banana	cytosol	80.72	79.76
Zm00001d014883_P001	Maize	cytosol, extracellular, mitochondrion	79.52	78.57
Os02t0761900-01	Rice	cytosol, extracellular, plasma membrane, plastid	78.31	77.38
EES02468	Sorghum	cytosol	72.89	72.02
TraesCS7A01G558200.1	Wheat	cytosol, plastid	72.29	71.43
Zm00001d039841_P001	Maize	extracellular	72.29	71.43
Os02t0762100-01	Rice	cytosol, plasma membrane	71.69	70.83
TraesCS7D01G551600.1	Wheat	cytosol, unclear	71.69	70.83
VIT_04s0023g00590.t01	Wine grape	cytosol	84.34	70.71
TraesCS7B01G483100.1	Wheat	cytosol	70.48	69.64
HORVU1Hr1G058220.1	Barley	cytosol	21.69	69.23
CDY20739	Canola	cytosol	68.07	68.07
CDY36787	Canola	cytosol	68.07	68.07
CDY11948	Canola	cytosol	68.07	68.07
TraesCS7D01G552200.1	Wheat	cytosol	68.67	67.86
CDY06513	Canola	cytosol	67.47	67.47
HORVU5Hr1G024120.1	Barley	cytosol	34.94	63.04
HORVU1Hr1G045180.2	Barley	cytosol	24.1	62.5
CDX96297	Canola	cytosol	29.52	59.76
HORVU1Hr1G040320.1	Barley	cytosol	31.33	59.09
HORVU1Hr1G010560.1	Barley	cytosol	21.69	56.25
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	84.94	56.18
CDY32800	Canola	cytosol	25.3	56.0
CDY62102	Canola	cytosol	29.52	55.06
HORVU3Hr1G024340.2	Barley	cytosol	33.73	54.37
KXG31862	Sorghum	cytosol	54.82	51.12
HORVU3Hr1G110300.1	Barley	cytosol	34.34	50.44
HORVU7Hr1G120490.20	Barley	plastid	80.72	49.45
HORVU3Hr1G042110.1	Barley	mitochondrion	28.31	46.08
HORVU5Hr1G074130.1	Barley	cytosol	38.55	42.95

Protein Annotations

Gene3D:3.50.30.40	MapMan:35.1	GO:A0A078JNP0	UniProt:A0A078JNP0	ProteinID:CDY53745.1	EnsemblPlants:CDY69168
ProteinID:CDY69168	ProteinID:CDY69168.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008428	GO:GO:0008948	GO:GO:0009987	GO:GO:0016829
GO:GO:0030234	GO:GO:0043086	GO:GO:0046872	GO:GO:0047443	GO:GO:0051252	EnsemblPlantsGene:GSBRNA2T00083847001
PFAM:PF03737	PANTHER:PTHR33254	PANTHER:PTHR33254:SF13	InterPro:RraA	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf
SUPFAM:SSF89562	TIGRFAMs:TIGR01935	UniParc:UPI0001890A7B	:	:	:

Description

BnaAnng29540D4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A078JNP0]

Coordinates

chrLK038783:-:2584..4007

Molecular Weight (calculated)

17780.4 Da

IEP (calculated)

5.216

GRAVY (calculated)

0.057

Length

166 amino acids

Sequence
(BLAST)

001: MAFVTTAEVC DANQDLIRSG QLRALQPSFQ IYGRRQIFSG PVVTVKVFED NGLIRQFLEE KGNGRVLVVD GGGSLRCAIL GGNPVVQAQN NGWAGIIVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPLNIA GTRICDGEWL YADTDGILVS QVELSV

Best Arabidopsis Sequence Match ( AT3G02770.1 )
(BLAST)

001: MAFVTTAEVC DANQEMIRSG QLRALQPVFQ IYGRRQIFSG PVVTVKVFED NGLIRHFLEE KGNGRVLVVD GGGSLRCAIL GGNPVVQAQN NGWAGIIVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVSLNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8R9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.