Factsheet for TraesCS7A01G558200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G551600.1	Wheat	cytosol, unclear	95.83	95.83
TraesCS7B01G483100.1	Wheat	cytosol	94.05	94.05
TraesCS7D01G552200.1	Wheat	cytosol	91.67	91.67
TraesCS7A01G558300.1	Wheat	cytosol, extracellular	83.93	83.93
Os02t0762100-01	Rice	cytosol, plasma membrane	79.76	79.76
Zm00001d039841_P001	Maize	extracellular	77.98	77.98
GSMUA_Achr4P11830_001	Banana	cytosol	77.38	77.38
GSMUA_Achr3P14020_001	Banana	cytosol	77.38	77.38
PGSC0003DMT400075872	Potato	cytosol	75.0	75.9
KRH40302	Soybean	cytosol, nucleus	75.0	75.9
EES02468	Sorghum	cytosol	75.0	75.0
KRH00921	Soybean	cytosol	73.81	74.7
GSMUA_Achr4P05260_001	Banana	cytosol	64.29	73.97
AT3G02770.1	Thale cress	cytosol	72.02	72.89
CDX70694	Canola	cytosol	72.02	72.89
CDY53745	Canola	cytosol	71.43	72.29
AT5G16450.1	Thale cress	cytosol	71.43	72.29
Bra001062.1-P	Field mustard	cytosol	71.43	72.29
Bra021412.1-P	Field mustard	cytosol	71.43	72.29
CDX74237	Canola	cytosol	71.43	72.29
CDY69168	Canola	cytosol	71.43	72.29
CDX78691	Canola	cytosol	70.83	71.69
CDX92011	Canola	cytosol	70.83	71.69
Bra006355.1-P	Field mustard	cytosol	70.24	71.08
VIT_04s0023g00590.t01	Wine grape	cytosol	73.81	62.63
TraesCS7A01G538200.1	Wheat	cytosol	55.95	55.29
TraesCS7A01G538400.1	Wheat	cytosol	55.95	55.29
TraesCS7A01G538000.1	Wheat	cytosol	55.36	54.71
TraesCS7A01G538300.1	Wheat	cytosol	55.36	54.71
TraesCS7A01G538100.1	Wheat	cytosol	54.76	54.12
KXG31862	Sorghum	cytosol	55.36	52.25
CDX96297	Canola	cytosol	25.0	51.22
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	75.0	50.2

Protein Annotations

EnsemblPlants:TraesCS7A01G558200.1	EnsemblPlantsGene:TraesCS7A01G558200	Gene3D:3.50.30.40	GO:GO:0003674	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008428	GO:GO:0009987	GO:GO:0030234	GO:GO:0051252	InterPro:RraA
InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	PANTHER:PTHR33254	PANTHER:PTHR33254:SF15	PFAM:PF03737	SEG:seg
SUPFAM:SSF89562	TIGR:cd16841	TIGRFAMs:TIGR01935	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7A:-:730713899..730715787

Molecular Weight (calculated)

17883.7 Da

IEP (calculated)

6.255

GRAVY (calculated)

0.133

Length

168 amino acids

Sequence
(BLAST)

001: MAALPLATAE VCDANSHMIT SGELRALQPV FRVYGGRRLF AGPVVTVKVF EDNVLVRALL EEKGQGRVLV VDGGGSLRRA LLGGNIAMLA QNNGWAGIVI
101: NGCVRDVDEI NECDIGVRAL GSHPMKSDKR GMGEKHVPVT VAGTRICDGE WLYADADGIL VSRTELSV

Best Arabidopsis Sequence Match ( AT5G16450.2 )
(BLAST)

001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.