Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G552200.1 | Wheat | cytosol | 94.64 | 94.64 |
| TraesCS7A01G558200.1 | Wheat | cytosol, plastid | 94.05 | 94.05 |
| TraesCS7B01G483200.1 | Wheat | cytosol | 79.76 | 79.76 |
| Zm00001d039841_P001 | Maize | extracellular | 78.57 | 78.57 |
| Os02t0762100-01 | Rice | cytosol, plasma membrane | 76.79 | 76.79 |
| EES02468 | Sorghum | cytosol | 76.79 | 76.79 |
| GSMUA_Achr4P11830_001 | Banana | cytosol | 76.19 | 76.19 |
| GSMUA_Achr3P14020_001 | Banana | cytosol | 76.19 | 76.19 |
| PGSC0003DMT400075872 | Potato | cytosol | 73.21 | 74.1 |
| KRH40302 | Soybean | cytosol, nucleus | 72.62 | 73.49 |
| GSMUA_Achr4P05260_001 | Banana | cytosol | 63.1 | 72.6 |
| KRH00921 | Soybean | cytosol | 71.43 | 72.29 |
| AT3G02770.1 | Thale cress | cytosol | 70.24 | 71.08 |
| CDX70694 | Canola | cytosol | 70.24 | 71.08 |
| AT5G16450.1 | Thale cress | cytosol | 69.64 | 70.48 |
| CDY69168 | Canola | cytosol | 69.64 | 70.48 |
| Bra001062.1-P | Field mustard | cytosol | 69.64 | 70.48 |
| Bra021412.1-P | Field mustard | cytosol | 69.64 | 70.48 |
| CDX74237 | Canola | cytosol | 69.64 | 70.48 |
| CDY53745 | Canola | cytosol | 69.64 | 70.48 |
| CDX78691 | Canola | cytosol | 69.05 | 69.88 |
| CDX92011 | Canola | cytosol | 69.05 | 69.88 |
| Bra006355.1-P | Field mustard | cytosol | 68.45 | 69.28 |
| VIT_04s0023g00590.t01 | Wine grape | cytosol | 72.02 | 61.11 |
| TraesCS7B01G456500.1 | Wheat | cytosol | 55.36 | 54.71 |
| TraesCS7B01G458800.1 | Wheat | cytosol | 55.36 | 54.71 |
| KXG31862 | Sorghum | cytosol | 55.95 | 52.81 |
| Solyc04g008280.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, unclear | 73.21 | 49.0 |
| CDX96297 | Canola | cytosol | 23.81 | 48.78 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G483100.1 | EnsemblPlantsGene:TraesCS7B01G483100 | Gene3D:3.50.30.40 | GO:GO:0003674 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008428 | GO:GO:0009987 | GO:GO:0030234 | GO:GO:0051252 | InterPro:RraA |
| InterPro:RraA/RraA-like | InterPro:RraA/RraA-like_sf | PANTHER:PTHR33254 | PANTHER:PTHR33254:SF15 | PFAM:PF03737 | SEG:seg |
| SUPFAM:SSF89562 | TIGR:cd16841 | TIGRFAMs:TIGR01935 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7B:-:741247390..741249665
Molecular Weight (calculated)
17787.6 Da
IEP (calculated)
5.802
GRAVY (calculated)
0.118
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALPLATAE ACDANARMIT SGELRALQPV FRMYGGRRLF AGPVVTVKVF EDNVLVRGIL EEKGEGRVLV VDGGGSLRRA LLGGNIAMLA QNNGWAGIVI
101: NGCVRDVDEI NECDIGVRAL GSHPMKSDKR GVGEKHAPVT VAGARICDGE WLYADADGIL VSRTELSV
101: NGCVRDVDEI NECDIGVRAL GSHPMKSDKR GVGEKHAPVT VAGARICDGE WLYADADGIL VSRTELSV
001: MAAFATAEAC DSNAELISNG DLRALHPIFK IYGQRRCFSG PIVTLKVFED NVLVRNQLET KGEGGVLVID GGGSMRCALV GGNLGQLAQN NGWSGIVVNG
101: CVRDVDEIND CDVGVRALGS NPLKSTKKGH GEKNVPVHIG GTLIRDGEWL YADSDGILIS KTELSV
101: CVRDVDEIND CDVGVRALGS NPLKSTKKGH GEKNVPVHIG GTLIRDGEWL YADSDGILIS KTELSV
Arabidopsis Description
Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [Source:TAIR;Acc:AT5G56260]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.