Factsheet for TraesCS7D01G551700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G483200.1	Wheat	cytosol	100.0	100.0
TraesCS7A01G558300.1	Wheat	cytosol, extracellular	98.81	98.81
Os02t0761900-01	Rice	cytosol, extracellular, plasma membrane, plastid	94.05	94.05
Zm00001d014883_P001	Maize	cytosol, extracellular, mitochondrion	92.86	92.86
GSMUA_Achr4P11830_001	Banana	cytosol	90.48	90.48
GSMUA_Achr3P14020_001	Banana	cytosol	89.88	89.88
GSMUA_Achr4P05260_001	Banana	cytosol	77.98	89.73
KRH40302	Soybean	cytosol, nucleus	88.1	89.16
KRH00921	Soybean	cytosol	86.9	87.95
HORVU1Hr1G045180.2	Barley	cytosol	33.33	87.5
PGSC0003DMT400075872	Potato	cytosol	85.71	86.75
HORVU1Hr1G010560.1	Barley	cytosol	32.14	84.38
HORVU5Hr1G024120.1	Barley	cytosol	45.83	83.7
TraesCS7D01G551600.1	Wheat	cytosol, unclear	82.14	82.14
CDX70694	Canola	cytosol	80.95	81.93
AT5G16450.1	Thale cress	cytosol	80.36	81.33
CDY53745	Canola	cytosol	80.36	81.33
Bra001062.1-P	Field mustard	cytosol	80.36	81.33
Bra021412.1-P	Field mustard	cytosol	80.36	81.33
CDX74237	Canola	cytosol	80.36	81.33
CDY69168	Canola	cytosol	80.36	81.33
AT3G02770.1	Thale cress	cytosol	79.76	80.72
CDX78691	Canola	cytosol	79.76	80.72
Bra006355.1-P	Field mustard	cytosol	79.17	80.12
CDX92011	Canola	cytosol	79.17	80.12
HORVU1Hr1G040320.1	Barley	cytosol	41.07	78.41
TraesCS7D01G552200.1	Wheat	cytosol	77.98	77.98
HORVU1Hr1G058220.1	Barley	cytosol	23.81	76.92
VIT_04s0023g00590.t01	Wine grape	cytosol	85.71	72.73
HORVU3Hr1G024340.2	Barley	cytosol	44.05	71.84
HORVU3Hr1G110300.1	Barley	cytosol	45.24	67.26
Solyc04g008280.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, unclear	85.71	57.37
HORVU5Hr1G074130.1	Barley	cytosol	48.81	55.03
CDX96297	Canola	cytosol	26.19	53.66
HORVU3Hr1G042110.1	Barley	mitochondrion	32.14	52.94

Protein Annotations

EnsemblPlants:TraesCS7D01G551700.1	EnsemblPlantsGene:TraesCS7D01G551700	Gene3D:3.50.30.40	GO:GO:0003674	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008428	GO:GO:0009987	GO:GO:0030234	GO:GO:0051252	InterPro:RraA
InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	PANTHER:PTHR33254	PANTHER:PTHR33254:SF15	PFAM:PF03737	SUPFAM:SSF89562
TIGR:cd16841	TIGRFAMs:TIGR01935	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7D:-:634897788..634898294

Molecular Weight (calculated)

17936.8 Da

IEP (calculated)

5.685

GRAVY (calculated)

0.117

Length

168 amino acids

Sequence
(BLAST)

001: MAALPLATAE VCDANSHLIT GGELRALQPV FQIYGRRQVF AGPIVTLKVF EDNVLVREFL EEKGQGRVLV VDGGGSLRCA ILGGNPVQQA QNNGWAGIVV
101: NGCIRDVDEI NGCDIGVRAL ASHPMKANKK GMGEKHVPVT IAGTRICDGE WLYADTDGIL VSRTELIV

Best Arabidopsis Sequence Match ( AT5G16450.2 )
(BLAST)

001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.