Factsheet for GSMUA_Achr9P15990_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
cytosol 2
peroxisome 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P09070_001
GSMUA_Achr2P00240_001
GSMUA_Achr5P03950_001
GSMUA_Achr5P18560_001
GSMUA_Achr8P18960_001
GSMUA_Achr9P15990_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	GSMUA_Achr11P...	AT2G37040.1	21798944
AT2G37040.1	GSMUA_Achr11P...	AT2G37040.1	21798944
AT2G37040.1	GSMUA_Achr1P09070_001	AT2G37040.1	21798944
AT2G37040.1	GSMUA_Achr2P00240_001	AT2G37040.1	21798944
AT2G37040.1	GSMUA_Achr5P03950_001	AT2G37040.1	21798944
AT2G37040.1	GSMUA_Achr5P18560_001	AT2G37040.1	21798944
AT2G37040.1	GSMUA_Achr8P18960_001	AT2G37040.1	21798944
AT2G37040.1	GSMUA_Achr9P15990_001	AT2G37040.1	21798944
AT2G37040.1	GSMUA_Achr11P...	AT3G10340.1	21798944
AT2G37040.1	GSMUA_Achr11P...	AT3G10340.1	21798944
AT2G37040.1	GSMUA_Achr1P09070_001	AT3G10340.1	21798944
AT2G37040.1	GSMUA_Achr2P00240_001	AT3G10340.1	21798944
AT2G37040.1	GSMUA_Achr5P03950_001	AT3G10340.1	21798944
AT2G37040.1	GSMUA_Achr5P18560_001	AT3G10340.1	21798944
AT2G37040.1	GSMUA_Achr8P18960_001	AT3G10340.1	21798944
AT2G37040.1	GSMUA_Achr9P15990_001	AT3G10340.1	21798944
AT3G10340.1	GSMUA_AchrUn_...	AT1G15670.1	21798944
AT3G53260.1	GSMUA_Achr11P...	AT3G10340.1	21798944
AT3G53260.1	GSMUA_Achr11P...	AT3G10340.1	21798944
AT3G53260.1	GSMUA_Achr1P09070_001	AT3G10340.1	21798944
AT3G53260.1	GSMUA_Achr2P00240_001	AT3G10340.1	21798944
AT3G53260.1	GSMUA_Achr5P03950_001	AT3G10340.1	21798944
AT3G53260.1	GSMUA_Achr5P18560_001	AT3G10340.1	21798944
AT3G53260.1	GSMUA_Achr8P18960_001	AT3G10340.1	21798944
AT3G53260.1	GSMUA_Achr9P15990_001	AT3G10340.1	21798944
AT3G53260.1	GSMUA_Achr11P...	AT3G53260.1	21798944
AT3G53260.1	GSMUA_Achr11P...	AT3G53260.1	21798944
AT3G53260.1	GSMUA_Achr1P09070_001	AT3G53260.1	21798944
AT3G53260.1	GSMUA_Achr2P00240_001	AT3G53260.1	21798944
AT3G53260.1	GSMUA_Achr5P03950_001	AT3G53260.1	21798944
AT3G53260.1	GSMUA_Achr5P18560_001	AT3G53260.1	21798944
AT3G53260.1	GSMUA_Achr8P18960_001	AT3G53260.1	21798944
AT3G53260.1	GSMUA_Achr9P15990_001	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g036480.1.1	Tomato	peroxisome	10.95	75.49
VIT_11s0016g01640.t01	Wine grape	peroxisome	66.0	69.77
VIT_11s0016g01660.t01	Wine grape	peroxisome	16.79	67.82
Solyc03g036470.1.1	Tomato	mitochondrion	21.76	66.81
CDY18464	Canola	peroxisome	37.41	62.17
PGSC0003DMT400080765	Potato	peroxisome	38.26	61.84
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	45.38	61.35
Solyc03g042560.1.1	Tomato	peroxisome	40.54	61.16
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	43.24	61.04
TraesCS1D01G039300.1	Wheat	mitochondrion	45.52	60.72
PGSC0003DMT400055489	Potato	mitochondrion	33.57	60.36
Solyc03g078280.1.1	Tomato	peroxisome	22.05	60.08
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	51.35	60.07
GSMUA_Achr2P00240_001	Banana	peroxisome	55.62	59.88
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	55.76	59.85
TraesCS3B01G027800.1	Wheat	mitochondrion	46.23	59.74
GSMUA_Achr1P09070_001	Banana	peroxisome	55.48	59.63
CDX99621	Canola	mitochondrion	46.37	59.6
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	55.19	59.51
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	30.87	59.45
GSMUA_Achr11P...	Banana	peroxisome	54.34	59.41
VIT_11s0016g01520.t01	Wine grape	peroxisome	75.53	59.33
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	54.91	59.29
TraesCS5B01G468400.1	Wheat	peroxisome	46.23	58.88
HORVU2Hr1G089540.1	Barley	peroxisome	39.26	58.85
CDX67566	Canola	cytosol	39.97	57.23
Solyc10g086180.1.1	Tomato	extracellular	57.75	57.1
Zm00001d051163_P002	Maize	peroxisome	58.18	56.96
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.62	56.91
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	57.47	56.82
CDX78161	Canola	cytosol	39.97	56.65
TraesCS2D01G204400.1	Wheat	peroxisome	53.77	56.59
Os02t0626400-01	Rice	mitochondrion, plasma membrane	57.61	56.41
AT3G10340.1	Thale cress	peroxisome	56.61	56.29
EES07175	Sorghum	cytosol, peroxisome, plastid	57.47	56.27
CDY66761	Canola	cytosol, peroxisome, plastid	41.54	56.26
CDX73567	Canola	cytosol	39.69	56.25
Zm00001d017276_P001	Maize	peroxisome	56.33	56.25
Solyc09g007910.2.1	Tomato	extracellular, nucleus	57.61	56.17
Bra003126.1-P	Field mustard	cytosol	56.47	56.15
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	57.61	56.09
Zm00001d003015_P001	Maize	peroxisome	57.04	56.08
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	56.76	56.04
OQU81984	Sorghum	peroxisome	56.9	56.02
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	57.18	55.91
Zm00001d017275_P001	Maize	extracellular	57.18	55.91
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	56.61	55.9
TraesCS6D01G212500.1	Wheat	peroxisome	56.61	55.9
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	57.33	55.89
Os04t0518400-01	Rice	extracellular, plasma membrane	56.76	55.88
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	54.77	55.88
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	11.52	55.86
CDY00922	Canola	cytosol	56.05	55.81
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	56.47	55.76
Solyc09g007920.2.1	Tomato	extracellular, nucleus	57.18	55.76
CDX76219	Canola	cytosol	41.39	55.75
EES05455	Sorghum	cytosol, peroxisome, plastid	56.61	55.74
EES07176	Sorghum	cytosol, peroxisome, plastid	56.61	55.74
EES07177	Sorghum	cytosol, peroxisome, plastid	56.61	55.74
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	56.05	55.73
TraesCS2D01G204700.1	Wheat	peroxisome	56.05	55.73
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	52.92	55.69
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	56.61	55.66
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	55.9	55.59
TraesCS2A01G196700.1	Wheat	peroxisome	55.9	55.59
TraesCS2D01G218700.1	Wheat	peroxisome	55.9	55.59
Os02t0627100-01	Rice	plasma membrane	56.33	55.54
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	56.47	55.52
Bra029831.1-P	Field mustard	cytosol	55.76	55.52
Solyc09g007890.1.1	Tomato	plastid	56.76	55.49
EES12521	Sorghum	cytosol	55.48	55.48
TraesCS6B01G258500.1	Wheat	extracellular, unclear	56.33	55.46
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	55.76	55.45
TraesCS1D01G039400.1	Wheat	golgi	55.76	55.45
TraesCS2B01G224000.1	Wheat	peroxisome	55.76	55.45
CDY08611	Canola	cytosol	55.62	55.38
AT3G53260.1	Thale cress	cytosol	56.47	55.37
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	55.76	55.37
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	55.76	55.37
Os02t0626100-01	Rice	extracellular, plasma membrane	55.19	55.35
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	56.19	55.32
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	55.62	55.3
EES07174	Sorghum	cytosol, peroxisome, plastid	55.33	55.26
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	55.33	55.26
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	55.33	55.26
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	55.48	55.24
Zm00001d051161_P003	Maize	plastid	55.19	55.19
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	56.05	55.18
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	56.19	55.17
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	55.48	55.16
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	55.48	55.16
TraesCS2D01G377600.1	Wheat	plastid	55.62	55.15
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	55.9	55.12
TraesCS2B01G398000.2	Wheat	plastid	55.9	55.12
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	55.9	55.12
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	55.9	55.12
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	55.19	55.11
TraesCS2A01G212600.1	Wheat	cytosol	20.77	55.09
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	55.9	55.04
TraesCS2A01G381000.1	Wheat	plastid	55.76	54.98
Zm00001d017274_P001	Maize	plasma membrane	54.91	54.91
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	55.76	54.9
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	55.76	54.9
Zm00001d051166_P001	Maize	extracellular	55.9	54.89
TraesCS2A01G381100.1	Wheat	plastid	55.62	54.84
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	55.62	54.84
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	55.62	54.84
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	55.62	54.84
KRG91925	Soybean	cytosol, peroxisome, plastid	55.9	54.81
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	55.62	54.76
Os04t0518100-01	Rice	plasma membrane	55.05	54.74
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	55.48	54.7
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	55.48	54.7
Bra006985.1-P	Field mustard	cytosol	54.91	54.67
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	56.05	54.57
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	55.33	54.48
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	55.19	54.42
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	56.05	54.34
AT5G04230.2	Thale cress	peroxisome	53.77	54.15
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	55.48	53.94
Os02t0626600-00	Rice	plasma membrane	54.62	53.71
Zm00001d033286_P001	Maize	peroxisome	53.06	53.44
TraesCS3D01G016300.1	Wheat	peroxisome	52.35	53.41
TraesCS3B01G053900.1	Wheat	peroxisome	52.2	53.27
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	52.77	53.15
CDY15917	Canola	cytosol, peroxisome, plastid	52.77	53.15
TraesCS3A01G029200.1	Wheat	peroxisome	52.06	53.12
Zm00001d029015_P001	Maize	peroxisome	30.01	53.02
Bra039777.1-P	Field mustard	peroxisome	38.41	52.94
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	51.49	52.46
Os12t0520200-01	Rice	plasma membrane	50.64	52.35
TraesCS2B01G020100.1	Wheat	peroxisome	50.64	52.28
EER93773	Sorghum	peroxisome	52.35	51.9
HORVU6Hr1G058820.2	Barley	mitochondrion	51.92	51.48
TraesCSU01G030700.1	Wheat	peroxisome	49.5	51.25
HORVU2Hr1G089440.9	Barley	plasma membrane	55.62	50.98
TraesCS2B01G398300.2	Wheat	peroxisome	26.6	50.82
TraesCS3D01G016500.1	Wheat	peroxisome	49.79	50.8
Zm00001d020933_P001	Maize	mitochondrion	15.08	50.24
Zm00001d003016_P001	Maize	plastid	55.05	49.05
Zm00001d053619_P001	Maize	mitochondrion	27.17	45.15
Zm00001d027249_P001	Maize	peroxisome	12.94	40.81
CDY18463	Canola	peroxisome	14.94	39.92
Bra005221.1-P	Field mustard	peroxisome	20.2	38.27
CDX74991	Canola	peroxisome	19.91	36.84
CDX91331	Canola	peroxisome	19.91	36.84
CDY13306	Canola	peroxisome	10.95	36.67
PGSC0003DMT400055529	Potato	cytosol	8.53	35.93
Zm00001d051164_P001	Maize	peroxisome	6.97	31.21
HORVU2Hr1G062750.1	Barley	mitochondrion	7.97	30.43
Bra028793.1-P	Field mustard	peroxisome	12.52	29.93
Solyc03g071870.1.1	Tomato	peroxisome	6.97	28.49
CDY61769	Canola	peroxisome	10.24	28.46
Os12t0461300-00	Rice	plastid	9.96	27.67
Solyc10g011930.1.1	Tomato	cytosol	4.98	27.56
Solyc10g011920.1.1	Tomato	cytosol	4.84	26.77
Os08t0308300-00	Rice	plastid	6.26	23.4
VIT_11s0016g01510.t01	Wine grape	peroxisome	11.66	23.1

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:9.2.1.1.1
InterPro:Aromatic_Lyase	InterPro:Fumarase/histidase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006559	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009698	GO:GO:0009800	GO:GO:0009987	GO:GO:0016829	GO:GO:0016841
GO:GO:0019748	GO:GO:0045548	EnsemblPlantsGene:GSMUA_Achr9G15990_001	EnsemblPlants:GSMUA_Achr9P15990_001	EnsemblPlants:GSMUA_Achr9T15990_001	InterPro:IPR023144
InterPro:IPR024083	InterPro:L-Aspartase-like	UniProt:M0U0Q6	PFAM:PF00221	ScanProsite:PS00488	PANTHER:PTHR10362
PANTHER:PTHR10362:SF30	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase	InterPro:Phe_NH3-lyase_shielding_dom_sf	SUPFAM:SSF48557	TIGRFAMs:TIGR01226
UniParc:UPI000294FE73	SEG:seg	:	:	:	:

Description

Phenylalanine ammonia-lyase [Source:GMGC_GENE;Acc:GSMUA_Achr9G15990_001]

Coordinates

chr9:+:10706930..10709379

Molecular Weight (calculated)

77318.9 Da

IEP (calculated)

6.064

GRAVY (calculated)

-0.126

Length

703 amino acids

Sequence
(BLAST)

001: MDSPGSYIRP IRCFRPPTLP VPTDGINPIA VSGTSYVPDP PHWKKAAEAL SCAHFDEVHR MITQFSTLSS VDLEGTTLTV AQVAAVSRRL TVSVVLDADT
101: ARERVDRSAA WTELIRFLNA GVVGKEFLPS SYAKAAMLVR TNTLMQGYSG IRWELLEAIA KLMNCNMIPK LPLRGTITAS GDLVPLSYIA GLLTGRHNSR
201: VVTPEGDEIT SVEALKRVGI GAPFELQAKE GLALVNGTAV GSAVAATVCY DANILALLSV ILSAMFCEAM QGKPEFTDPL THELKHHPGQ IESAAIMEFL
301: LDGSDYMKEA KLRHEREPLT KPKQDRYALR TSPQWLGPQI EVIRTATHSI EREINSVNDN PLIDVARDIA LHGGNFQGTP IGVSMDNLRV ALAAIGKLVF
401: AQFSELVCDY YNDGLPSNLS AGADPSLDYG LKGAEIAMAA YCSELQYLAN PVTTHVQSAE QHNQDINSLG LISARKSAEA VEILKLMMAT YMIALCQAID
501: LRHLEENLRE VVKHVLLQSA RKSLYVAEDG RLTEARFCEK ELIQVAERQP VFSYIDDPAN PSYALMLQLR EVLVEKALEG TEEGMAAFKR IPKFQEELGS
601: ALNEEIAKAR ERFGRGDFIV GSRIKKCRTY PVYNFVREEV GTELLTGEKK VVVKCVGEWR GSAGPFTPRP EASSPALRNP ENWSWFEQVR SPSATSGRGY
701: WNL

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.