CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX67566
CDX69512
CDX73567
CDX76219
CDX78161
CDX85544
CDX90984
CDY00922
CDY08611
CDY13306
CDY26443
CDY66761

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53260.1	CDY00922	AT3G10340.1	21798944
AT3G53260.1	CDY08611	AT3G10340.1	21798944
AT3G53260.1	CDX67566	AT3G53260.1	21798944
AT3G53260.1	CDX73567	AT3G53260.1	21798944
AT3G53260.1	CDX76219	AT3G53260.1	21798944
AT3G53260.1	CDX78161	AT3G53260.1	21798944
AT3G53260.1	CDY13306	AT3G53260.1	21798944
AT3G53260.1	CDY66761	AT3G53260.1	21798944
AT3G53260.1	CDX69512	AT5G15600.1	21798944
AT3G53260.1	CDX85544	AT5G15600.1	21798944
AT3G53260.1	CDX90984	AT5G15600.1	21798944
AT3G53260.1	CDY26443	AT5G15600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66761	Canola	cytosol, peroxisome, plastid	98.08	98.65
CDX78161	Canola	cytosol	91.95	96.77
CDX73567	Canola	cytosol	91.57	96.37
CDX67566	Canola	cytosol	89.66	95.32
CDY13306	Canola	peroxisome	37.74	93.81
Bra039777.1-P	Field mustard	peroxisome	91.0	93.14
Solyc03g036470.1.1	Tomato	mitochondrion	36.21	82.53
Solyc03g036480.1.1	Tomato	peroxisome	16.09	82.35
CDY18463	Canola	peroxisome	39.08	77.57
HORVU2Hr1G089540.1	Barley	peroxisome	68.39	76.12
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	20.5	73.79
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	69.54	72.89
Zm00001d029015_P001	Maize	peroxisome	51.92	68.09
AT3G53260.1	Thale cress	cytosol	92.53	67.36
TraesCS5B01G468400.1	Wheat	peroxisome	70.88	67.03
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	74.33	64.56
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	63.6	63.85
Zm00001d027249_P001	Maize	peroxisome	27.2	63.68
Solyc03g071870.1.1	Tomato	peroxisome	20.69	62.79
Zm00001d020933_P001	Maize	mitochondrion	25.29	62.56
GSMUA_Achr1P09070_001	Banana	peroxisome	77.01	61.47
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	76.82	61.22
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	76.05	60.89
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	75.86	60.83
GSMUA_Achr2P00240_001	Banana	peroxisome	75.67	60.49
Solyc10g011930.1.1	Tomato	cytosol	14.56	59.84
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	77.78	59.1
Solyc10g011920.1.1	Tomato	cytosol	14.37	59.06
CDY00922	Canola	cytosol	79.12	58.5
CDY08611	Canola	cytosol	79.12	58.5
GSMUA_Achr11P...	Banana	peroxisome	72.03	58.48
Solyc09g007910.2.1	Tomato	extracellular, nucleus	80.65	58.39
KRG91925	Soybean	cytosol, peroxisome, plastid	80.08	58.3
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	80.46	58.25
Solyc09g007920.2.1	Tomato	extracellular, nucleus	80.46	58.25
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	79.12	58.09
Solyc09g007890.1.1	Tomato	plastid	79.89	58.0
Solyc10g086180.1.1	Tomato	extracellular	78.54	57.67
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	79.69	57.62
Zm00001d053619_P001	Maize	mitochondrion	46.36	57.21
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	78.74	57.16
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	74.71	56.6
TraesCS2D01G377600.1	Wheat	plastid	75.29	55.43
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	75.29	55.12
TraesCS1D01G039300.1	Wheat	mitochondrion	55.56	55.03
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	74.52	55.02
TraesCS2B01G398000.2	Wheat	plastid	75.1	54.98
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	75.1	54.98
Os04t0518400-01	Rice	extracellular, plasma membrane	75.1	54.9
TraesCS1D01G039400.1	Wheat	golgi	74.33	54.88
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	74.33	54.88
TraesCS2A01G381100.1	Wheat	plastid	74.9	54.84
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	74.71	54.7
TraesCS2D01G204400.1	Wheat	peroxisome	69.92	54.64
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	73.95	54.6
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	73.95	54.6
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	73.95	54.6
TraesCS2D01G204700.1	Wheat	peroxisome	73.95	54.6
TraesCS2D01G218700.1	Wheat	peroxisome	73.95	54.6
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	74.52	54.56
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	74.52	54.56
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	73.75	54.53
TraesCS2A01G196700.1	Wheat	peroxisome	73.75	54.46
TraesCS2B01G224000.1	Wheat	peroxisome	73.75	54.46
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	74.33	54.42
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	74.33	54.42
TraesCS2A01G381000.1	Wheat	plastid	74.33	54.42
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	74.33	54.42
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	73.75	54.38
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	74.33	54.34
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	74.33	54.34
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	74.33	54.34
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	74.33	54.34
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	73.56	54.31
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	74.14	54.28
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	73.56	54.24
Os02t0626400-01	Rice	mitochondrion, plasma membrane	74.52	54.18
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	73.75	54.07
TraesCS6D01G212500.1	Wheat	peroxisome	73.75	54.07
TraesCS6B01G258500.1	Wheat	extracellular, unclear	73.95	54.06
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	73.95	53.99
Zm00001d017276_P001	Maize	peroxisome	72.8	53.98
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	73.75	53.92
Os02t0627100-01	Rice	plasma membrane	73.56	53.86
Zm00001d003015_P001	Maize	peroxisome	73.75	53.85
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	73.37	53.79
OQU81984	Sorghum	peroxisome	73.56	53.78
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	73.56	53.78
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	73.56	53.78
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	73.75	53.77
CDY15917	Canola	cytosol, peroxisome, plastid	71.84	53.72
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	73.18	53.65
EES05455	Sorghum	cytosol, peroxisome, plastid	73.37	53.64
EES07176	Sorghum	cytosol, peroxisome, plastid	73.37	53.64
EES07177	Sorghum	cytosol, peroxisome, plastid	73.37	53.64
Zm00001d051164_P001	Maize	peroxisome	16.09	53.5
Zm00001d051166_P001	Maize	extracellular	73.37	53.49
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	72.99	53.29
Zm00001d017275_P001	Maize	extracellular	73.37	53.27
Zm00001d051163_P002	Maize	peroxisome	73.18	53.2
EES07175	Sorghum	cytosol, peroxisome, plastid	72.8	52.92
TraesCS2B01G020100.1	Wheat	peroxisome	68.77	52.72
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	67.43	52.69
CDX99621	Canola	mitochondrion	54.21	51.74
HORVU2Hr1G089440.9	Barley	plasma membrane	75.1	51.11
Os02t0626100-01	Rice	extracellular, plasma membrane	68.2	50.78
Os02t0626600-00	Rice	plasma membrane	69.54	50.77
EES12521	Sorghum	cytosol	68.2	50.64
Zm00001d017274_P001	Maize	plasma membrane	68.01	50.5
Zm00001d051161_P003	Maize	plastid	67.62	50.21
Os04t0518100-01	Rice	plasma membrane	68.01	50.21
EES07174	Sorghum	cytosol, peroxisome, plastid	67.62	50.14
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	67.43	50.0
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	67.43	50.0
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	67.43	50.0
Zm00001d033286_P001	Maize	peroxisome	66.67	49.86
CDY18464	Canola	peroxisome	40.23	49.65
TraesCS3A01G029200.1	Wheat	peroxisome	64.75	49.06
TraesCS3D01G016300.1	Wheat	peroxisome	64.75	49.06
Os12t0520200-01	Rice	plasma membrane	63.79	48.97
TraesCS3B01G053900.1	Wheat	peroxisome	64.56	48.91
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	67.62	48.82
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	64.37	48.7
EER93773	Sorghum	peroxisome	65.33	48.1
Solyc03g042560.1.1	Tomato	peroxisome	42.91	48.07
TraesCS3B01G027800.1	Wheat	mitochondrion	50.0	47.98
CDY61769	Canola	peroxisome	23.18	47.83
HORVU2Hr1G062750.1	Barley	mitochondrion	16.86	47.83
PGSC0003DMT400080765	Potato	peroxisome	39.46	47.36
TraesCS3D01G016500.1	Wheat	peroxisome	62.45	47.31
TraesCSU01G030700.1	Wheat	peroxisome	61.3	47.13
Zm00001d003016_P001	Maize	plastid	68.77	45.5
CDX74991	Canola	peroxisome	32.76	45.0
CDX91331	Canola	peroxisome	32.76	45.0
HORVU6Hr1G058820.2	Barley	mitochondrion	59.2	43.58
GSMUA_Achr9P15990_001	Banana	peroxisome	55.75	41.39
VIT_11s0016g01640.t01	Wine grape	peroxisome	52.3	41.05
PGSC0003DMT400055489	Potato	mitochondrion	30.27	40.41
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	26.63	38.08
VIT_11s0016g01520.t01	Wine grape	peroxisome	62.84	36.65
TraesCS2A01G212600.1	Wheat	cytosol	17.43	34.34
TraesCS2B01G398300.2	Wheat	peroxisome	22.41	31.79
Solyc03g078280.1.1	Tomato	peroxisome	13.22	26.74
VIT_11s0016g01510.t01	Wine grape	peroxisome	15.71	23.1
Os12t0461300-00	Rice	plastid	9.77	20.16
PGSC0003DMT400055529	Potato	cytosol	4.79	14.97
Os08t0308300-00	Rice	plastid	3.45	9.57
VIT_11s0016g01660.t01	Wine grape	peroxisome	0.38	1.15

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:9.2.1.1.1	GO:A0A078CJK0
InterPro:Aromatic_Lyase	EnsemblPlants:CDX76219	ProteinID:CDX76219	ProteinID:CDX76219.1	InterPro:Fumarase/histidase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006559
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009800	GO:GO:0009987
GO:GO:0016841	GO:GO:0019748	GO:GO:0045548	EnsemblPlantsGene:GSBRNA2T00126538001	InterPro:IPR024083	InterPro:L-Aspartase-like
PFAM:PF00221	ScanProsite:PS00488	PANTHER:PTHR10362	PANTHER:PTHR10362:SF30	MetaCyc:PWY-1121	MetaCyc:PWY-5883
MetaCyc:PWY-6444	MetaCyc:PWY-6457	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase	SUPFAM:SSF48557	TIGRFAMs:TIGR01226
UniPathway:UPA00713	UniParc:UPI0004EE41EA	:	:	:	:

Description

BnaA04g04830D

Coordinates

chrLK031806:+:1912204..1915959

Molecular Weight (calculated)

56071.2 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.129

Length

522 amino acids

Sequence
(BLAST)

001: MDQINGSVHQ NAKTEAMLLC GGLEKTKVTV AADPLNWGAA AEQMKGSHLD EVKRMVEDYR KPVVNLGGET LTIGQVAAIS NVGGGVKVEL AEASRAGVKA
101: SSDWVMESMG KGTDSYGVTT GFGATSHRRT KNGTALQTEL IRFLNAGIFG NTKETCHTLP ESATRAAMLV RVNTLLQGYS GIRFEILEAI TSLLNHNISP
201: SLPLRGTITA SGDLVPLSYI AGLLTGRPNS KATGPSGESL TAEEAFKKAG ITSGFFDLQP KEGLALISQY NGTAVGSGMA SMVLFEANVQ SVLAEVLSAI
301: FAEVMSGKPE FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRH ATKSIEREIN SVNDNPLIDV
401: SRNKAIHGGN FQGTPIGVSM DNTRLAVAAI GKLMFAQFSE LVNDFYNNGL PSNLTASNNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH FDKVFTAMCE
501: GKIIDPLMDC LKEWNGAPIP IC

Best Arabidopsis Sequence Match ( AT3G53260.1 )
(BLAST)

001: MDQIEAMLCG GGEKTKVAVT TKTLADPLNW GLAADQMKGS HLDEVKKMVE EYRRPVVNLG GETLTIGQVA AISTVGGSVK VELAETSRAG VKASSDWVME
101: SMNKGTDSYG VTTGFGATSH RRTKNGTALQ TELIRFLNAG IFGNTKETCH TLPQSATRAA MLVRVNTLLQ GYSGIRFEIL EAITSLLNHN ISPSLPLRGT
201: ITASGDLVPL SYIAGLLTGR PNSKATGPDG ESLTAKEAFE KAGISTGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ AVLAEVLSAI FAEVMSGKPE
301: FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRQ ATKSIEREIN SVNDNPLIDV SRNKAIHGGN
401: FQGTPIGVSM DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLTASSNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH VQSAEQHNQD VNSLGLISSR
501: KTSEAVDILK LMSTTFLVGI CQAVDLRHLE ENLRQTVKNT VSQVAKKVLT TGINGELHPS RFCEKDLLKV VDREQVFTYV DDPCSATYPL MQRLRQVIVD
601: HALSNGETEK NAVTSIFQKI GAFEEELKAV LPKEVEAARA AYGNGTAPIP NRIKECRSYP LYRFVREELG TKLLTGEKVV SPGEEFDKVF TAMCEGKLID
701: PLMDCLKEWN GAPIPIC

Arabidopsis Description

PAL2Phenylalanine ammonia-lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:P45724]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.