Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 98.17 | 98.17 |
| HORVU6Hr1G058840.1 | Barley | cytosol, peroxisome, plasma membrane | 97.33 | 97.33 |
| TraesCS6D01G212500.1 | Wheat | peroxisome | 97.05 | 97.05 |
| Os05t0427400-00 | Rice | cytosol, peroxisome, plastid | 90.17 | 89.66 |
| TraesCS1A01G094900.1 | Wheat | cytosol, peroxisome, plastid | 62.22 | 88.96 |
| TraesCS4A01G401300.1 | Wheat | cytosol, peroxisome, plastid | 87.36 | 87.24 |
| TraesCS2A01G380800.1 | Wheat | cytosol, peroxisome, plastid | 87.22 | 87.1 |
| TraesCS2A01G381000.1 | Wheat | plastid | 86.94 | 86.82 |
| TraesCS2A01G381100.1 | Wheat | plastid | 86.8 | 86.68 |
| TraesCS2A01G380900.1 | Wheat | cytosol, peroxisome, plastid | 86.8 | 86.68 |
| TraesCS1A01G037700.1 | Wheat | cytosol, peroxisome, plastid | 85.39 | 86.0 |
| TraesCS2A01G196700.1 | Wheat | peroxisome | 85.39 | 86.0 |
| TraesCS2A01G212900.1 | Wheat | cytosol, peroxisome, plastid | 85.25 | 85.86 |
| TraesCS1A01G037800.1 | Wheat | cytosol, peroxisome, plastid | 85.96 | 85.71 |
| TraesCS6A01G222800.1 | Wheat | cytosol, peroxisome, plastid | 85.25 | 85.01 |
| TraesCS2A01G196400.1 | Wheat | mitochondrion, plastid | 78.65 | 83.83 |
| TraesCS2A01G212600.1 | Wheat | cytosol | 30.2 | 81.13 |
| CDY18464 | Canola | peroxisome | 46.07 | 77.54 |
| CDX78161 | Canola | cytosol | 51.97 | 74.6 |
| CDX73567 | Canola | cytosol | 51.97 | 74.6 |
| CDX67566 | Canola | cytosol | 51.4 | 74.54 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 73.17 | 74.01 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 53.93 | 73.99 |
| AT3G10340.1 | Thale cress | peroxisome | 73.17 | 73.69 |
| CDY00922 | Canola | cytosol | 72.89 | 73.51 |
| Bra029831.1-P | Field mustard | cytosol | 72.75 | 73.37 |
| CDX76219 | Canola | cytosol | 53.65 | 73.18 |
| CDY08611 | Canola | cytosol | 72.33 | 72.95 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 73.88 | 72.85 |
| Bra003126.1-P | Field mustard | cytosol | 72.05 | 72.56 |
| AT3G53260.1 | Thale cress | cytosol | 72.61 | 72.11 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 73.17 | 71.86 |
| Bra006985.1-P | Field mustard | cytosol | 71.21 | 71.81 |
| Bra039777.1-P | Field mustard | peroxisome | 50.56 | 70.59 |
| TraesCS3A01G029200.1 | Wheat | peroxisome | 67.28 | 69.52 |
| CDX99621 | Canola | mitochondrion | 53.09 | 69.1 |
| AT5G04230.2 | Thale cress | peroxisome | 67.28 | 68.62 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 64.89 | 66.19 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 64.75 | 66.05 |
| Bra005221.1-P | Field mustard | peroxisome | 33.57 | 64.42 |
| CDY13306 | Canola | peroxisome | 18.96 | 64.29 |
| CDY18463 | Canola | peroxisome | 23.31 | 63.12 |
| CDX74991 | Canola | peroxisome | 33.29 | 62.37 |
| CDX91331 | Canola | peroxisome | 33.29 | 62.37 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 54.49 | 58.35 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 55.76 | 56.47 |
| Bra028793.1-P | Field mustard | peroxisome | 21.49 | 52.04 |
| CDY61769 | Canola | peroxisome | 18.4 | 51.78 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 12.36 | 50.57 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 62.5 | 49.72 |
| TraesCS5A01G558600.1 | Wheat | mitochondrion | 17.7 | 30.07 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 14.19 | 28.45 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF31 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS6A01G222700 | EnsemblPlants:TraesCS6A01G222700.1 | TIGR:cd00332 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:416648422..416650746
Molecular Weight (calculated)
76585.3 Da
IEP (calculated)
6.318
GRAVY (calculated)
-0.042
Length
712 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENGGVAA NGNSVCMAIQ HTDPLNWGKA AEELTGSHLD EVKRMVADYR KPVVTIEGAS LSIAKVAAVA AAGEVVVELD ESARERVKAS SDWVMNSMMN
101: GTDSYGVTTG FGATSHRRTK EGGALQRELI RFLNAGAFGT GSDAHVLPAA TTRAAMLVRI NTLLQGYSGI RFEILEAVAK LLNANVTPCL PLRGTITASG
201: DLVPLSYIAG LVTGRENSVA IGPDGKKVNA AKAFKIAGIH GGFFELQPKE GLAMVNGTAV GSALASTVLF EANILALLAE VISAVFCEVM NGKPEFTDHL
301: THKLKHHPGQ IEAAAIMEHI LEGSSYMKLA KKLGDLDPLM KPKQDRYALR TSPQWLGPQI EVIRAATKSI EREINSVNDN PLIDVSRGKA IHGGNFQGTP
401: IGVSMDNTRL AIAAIGKLMF AQFSELVNDL YNNGLPSNLS GGRNPSLDYG FKGAEIAMAS YCSELQFLGN PVTNHVQSAE QHNQDVNSLG LISSRKTAEA
501: IEILKLMSST FLVALCQAID LRHIEENVKS AIKSCVSMVA KKTLSTNSTG GLHVARFCGK DLLQEIEREA VFAYADDPCS PNYPLMKKLR GVLVERALSN
601: GMAEFDAETS VFAKVALFEE ELRKTLPPAV EAARVAVESG TAEMPNRITE CRSYPLYRFV REELGTVYLT GEKTLSPGEE LNKVLVAMNQ GKHIDALLEC
701: LKEWNGEPLP IC
101: GTDSYGVTTG FGATSHRRTK EGGALQRELI RFLNAGAFGT GSDAHVLPAA TTRAAMLVRI NTLLQGYSGI RFEILEAVAK LLNANVTPCL PLRGTITASG
201: DLVPLSYIAG LVTGRENSVA IGPDGKKVNA AKAFKIAGIH GGFFELQPKE GLAMVNGTAV GSALASTVLF EANILALLAE VISAVFCEVM NGKPEFTDHL
301: THKLKHHPGQ IEAAAIMEHI LEGSSYMKLA KKLGDLDPLM KPKQDRYALR TSPQWLGPQI EVIRAATKSI EREINSVNDN PLIDVSRGKA IHGGNFQGTP
401: IGVSMDNTRL AIAAIGKLMF AQFSELVNDL YNNGLPSNLS GGRNPSLDYG FKGAEIAMAS YCSELQFLGN PVTNHVQSAE QHNQDVNSLG LISSRKTAEA
501: IEILKLMSST FLVALCQAID LRHIEENVKS AIKSCVSMVA KKTLSTNSTG GLHVARFCGK DLLQEIEREA VFAYADDPCS PNYPLMKKLR GVLVERALSN
601: GMAEFDAETS VFAKVALFEE ELRKTLPPAV EAARVAVESG TAEMPNRITE CRSYPLYRFV REELGTVYLT GEKTLSPGEE LNKVLVAMNQ GKHIDALLEC
701: LKEWNGEPLP IC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.